Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4191g00014 ATGGCTTCCCTTCATTATCCTCCATTTCCATCTGGGCTAGAGATTGAAACGACGACGTTAGATGTAAAAGAAGCATCAAGTTGTCCAACAAAGACGAAGAAGAAGAAGGATGATATTGATGGAGGAGAGGAGAAGGGGATATGGCTGACGTGGAAGGATGTGTGGGTGACAGCTTCTTCAAGTGGGAAGAAGAAGAAAGGGGTTAATGGAAGCAGAAAAATACTGGAAGGTCTCACTGGTTATGCAAAACCAGGACAGCTTTTGGCCATTATGGGTCCTTCGGGTTGTGGCAAGTCTACTCTTCTTGATACTTTAGCAGGGAGATTGGGTTCAAACACAAGGCAAGCAGGGGAAATTCTTATTAATGGCCACAAACAAGCACTTGCTTATGGCACCTCGGCGTATGTGACCCAAGATGATACTTTGCTCACAACCCTAACAGTTGGAGAAGCAGTGAACTATTCAGCTCAGCTTCAATTACCAGACACAATGTCCAAGGAAGAGAAAAAGGAGAGGGCAGAGTTCACAATAAGAGAAATGGGTCTGCAAGATGCCATTAACACCAGAATTGGAGGTTGGGGTTGTAAGGGAATCAGTGGAGGCCAAAAGAGGAGAGTGAGTATTTGTATAGAGATCCTGACACGTCCAAGACTTCTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTCATGAGCAGAATCGCCAGCCTTGATCGAAAGGATGGGATCCAGAGGACCATTATTGCATCCATTCATCAACCTAGTACTGAAGTGTTTCAGCTTTTTGATAATCTGTGTCTTCTTTCTTATGGAAGAACTGTGTTCTTTGGTCCTGTTTCTGCAGCAAGTGAGTTCTTTGCTTCAAATGGGTTTCCTTGTCCTGCTCTCCAGAATCCATCCGATCATTTCTTGAAAACTATAAATAATGATTTTGATGATCAGGACATTGAACTGGGCTTCGTTGGAACTCAAAGAAAAACTACAGAAGAAGCAATAGAAATGCTTGTGAAATCATACAAGTCTTCTAATTTGAACCAACAAGTTGAAGCAGAAGTAGCAGCGCTATCTCCACAGGAAACTGGAATGGTGGAGAAGAAGAAGGAGAAAAGAGGGCATGCAAGCTTCCATACTCAGTGCATTGTTCTTACAAAGAGATCATTTGTGAACATGCGTCGTGATGTAGGCTATTACTGGCTACGCCTTGTCATATACGTCGCCGTGGCGCTAGGTCTGGCCACTGTGTTCTATGATTTGGGTACGAGCAAAAGGTCGTCTGTTCAAGATAGAGTTTCACTTCTTGCGTTTGTGTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCTTCATTTGTAGAAGATATGAAGGTATTTCAAAGAGAAAGGCTAAATGGGCACTATGGAGTGACAGCCTATGTGATAGGAAACACATTATCTTCAATCCCATACCTAGTGCTCGCGACTCTCATTCCTGGGGCCATAGCCTATTACCTCCCAGGCCTTCAAAATTCTGCTGAACACTTCATGTTCTTCTGCAGTGTGCTATTTTCATGTCTGATGTTAGTTGAAAGCCTGATGATGATAGTGGCTAGCATCGTCCCTAACTTCCTCATGGGAATCATAACCGGTGCTGGTCTTCAAGGCATCATGATCCTCGCAGGAGGCTTCTTCAGATTGCCCAATGATCTTCCCAGAATCTTCTGGAAGTATCCTCTCTTCTACGTCGCCTTCCATAGATACGCTTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTCAGATTTGATAATCATTCTGGGGAAGAGATTCTGAGAAACGAATTGCAAGTCAACATGAGCTATTCTAAGTGGGTTGATCTTGCCGTTCTTCTGGGGATGATCGTTGTGTATAGAGTTGTGTTCTTGATAATCATAAAGGGCACTGAGAAGATGAAGCCTGTAGTTGCTTCTTTGCTTTCTGGAACTCCTAAGAGAAGCATACAGGTCATGGCTAATCCAAATGCTACACCTTTACAGAAGGCTTTGCATAAATTAAATCCAATGAGTTATTAG 2070 0.4338 MASLHYPPFPSGLEIETTTLDVKEASSCPTKTKKKKDDIDGGEEKGIWLTWKDVWVTASSSGKKKKGVNGSRKILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVNYSAQLQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSYGRTVFFGPVSAASEFFASNGFPCPALQNPSDHFLKTINNDFDDQDIELGFVGTQRKTTEEAIEMLVKSYKSSNLNQQVEAEVAALSPQETGMVEKKKEKRGHASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVAVALGLATVFYDLGTSKRSSVQDRVSLLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLVLATLIPGAIAYYLPGLQNSAEHFMFFCSVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPNDLPRIFWKYPLFYVAFHRYAYQGLFKNEFEGLRFDNHSGEEILRNELQVNMSYSKWVDLAVLLGMIVVYRVVFLIIIKGTEKMKPVVASLLSGTPKRSIQVMANPNATPLQKALHKLNPMSY 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4191g00014 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 659 - -
Pral4191g00014 689 Gene3D - 49 296 IPR027417 -
Pral4191g00014 689 Pfam ABC transporter 77 226 IPR003439 GO:0005524
Pral4191g00014 689 SMART AAA_5 84 278 IPR003593 GO:0016887
Pral4191g00014 689 Pfam ABC-2 type transporter 383 596 IPR013525 GO:0016020|GO:0140359
Pral4191g00014 689 FunFam ABC transporter G family member 11 47 344 - -
Pral4191g00014 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 290 IPR027417 -
Pral4191g00014 689 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524|GO:0016887
Pral4191g00014 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 301 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4191g00014 Pral-Chr4191 119235 125074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4191g00014 73 262 Calmodulin-binding Proteins AT2G36910 30.457 1.81e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4191g00014 K05681 - gmx:100813462 953.74