Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4188g00007 ATGGGTTCTGCAGAGGGAATGCCTGCAATAGAACTTGAAAACAGAAACCTTATTAATGTTTCTTCATCAGTTCCAAGAATAAGTTCTTCCTTTGAAGAGGCTACCTCGCTAGTTCATGACAAAGGGAAGCTCTCAGTTGTAAGACGTAAGGTGTTTAGTAGCATAAAAGTGGTAGTCCTCTCTACCAAAATAAACATACTCATGCCCTTCGGCCCTTTAGCTATTTTGGTCGATAAGTTGTTTCATAGTCACGGTTTGGTCTTTCTTTCCAGCCTTTTGGGCATATTACCTTTGGCTGAACGCTTAGGATATACAACTGAGCAATTGGTTTGTTTTACGGGACCCACAGTTGGAAGTCTTTTGAATGCCACATTTGGAAATGCAACTGAACTGATCATATCAATACATGCCCTCAAAAGTGGCTTGACTCGTGTTGTTCAGCAGTCACTGTTAGGTTCAATTCTGTCAAACCTATTGCTAGTTCTTGGAAGCGCATTCTTTGCTGGTGGCCTAGTGTTTTATCACAGAGAACAAATGTTTAACAATGCAGATATCGCAATAGACTTTGGGCTGCTTTTGATGGCTGTAATGAGCTTGTTATTTCCAGCAGTTCTCCATTCTACACATACAGAAGTAATTAATGGCAAGTCTGAGTTAGCTCTTTCAAGATTTACTAGCTGTATTATGCTTGTGGCTTATGCTTCTTACATAGCATTCCAACTAAATGGTCATCAGAATGCTCCGGTGGATAATGATGAGGAAAGAGGTCTAAGTGAAGAGAATTCAGCTGATGATGCAGAAACTCCTGAGATTTCTATGTGGGAATCAATAATATGGCTCTCTATCTTGACAATATGGATATCAATCCTGTCAGATTATTTGGTTAACACCATAGAGGGGGCGTCCGAAGACTTGAAAATACCTGTACCATTTATCAGTGTTATTCTTCTTCCTACAGTTGGGAATGCGACGGAACATGTCGGCGCTATCATATTTGCGGTAAAAGACAAGCTAGACATATCTCTTGGAGTAGCTGTGGGCTCTTCAATACAAATATCCATGTTTGTGATTCCATTTTGTGTGGTTGTGGGGTGGATAATTGGATGCCCTATGGATTTGAATTTTCAACCCTTTGAGACGGCTTCTCTCTTCGTAGTTGTTGTAATTGTTGCTTTCATGCTTCATAATGGAACATCCAACTATTTTAAAGGAATGATGCTTATTCTTTGCTACTTAATCGTGGGAGCAAGTTATTTTGTACATATTGATCCTACTTCAATAAATGATGCTGGTTGA 1296 0.3966 MGSAEGMPAIELENRNLINVSSSVPRISSSFEEATSLVHDKGKLSVVRRKVFSSIKVVVLSTKINILMPFGPLAILVDKLFHSHGLVFLSSLLGILPLAERLGYTTEQLVCFTGPTVGSLLNATFGNATELIISIHALKSGLTRVVQQSLLGSILSNLLLVLGSAFFAGGLVFYHREQMFNNADIAIDFGLLLMAVMSLLFPAVLHSTHTEVINGKSELALSRFTSCIMLVAYASYIAFQLNGHQNAPVDNDEERGLSEENSADDAETPEISMWESIIWLSILTIWISILSDYLVNTIEGASEDLKIPVPFISVILLPTVGNATEHVGAIIFAVKDKLDISLGVAVGSSIQISMFVIPFCVVVGWIIGCPMDLNFQPFETASLFVVVVIVAFMLHNGTSNYFKGMMLILCYLIVGASYFVHIDPTSINDAG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4188g00007 431 Gene3D - 262 418 IPR044880 -
Pral4188g00007 431 Gene3D - 115 260 IPR044880 -
Pral4188g00007 431 FunFam Vacuolar cation/proton exchanger 264 420 - -
Pral4188g00007 431 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 39 424 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral4188g00007 431 Pfam Sodium/calcium exchanger protein 86 241 IPR004837 GO:0016020|GO:0055085
Pral4188g00007 431 Pfam Sodium/calcium exchanger protein 277 413 IPR004837 GO:0016020|GO:0055085
Pral4188g00007 431 NCBIfam calcium/proton exchanger 68 419 IPR004798 GO:0006816|GO:0015369
Pral4188g00007 431 FunFam Vacuolar cation/proton exchanger 115 254 - -
Pral4188g00007 431 NCBIfam calcium/proton exchanger 51 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4188g00007 Pral-Chr4188 81914 99326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4188g00007 5 424 Antiporters AT3G13320 62.005 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4188g00007 K07300 - qsu:112036201 535.413