Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4187g00006 ATGGCAAAGGATGATGTCATACAAATCTTAGAAAGTTGTGGTCTTCACGCAAAAATTGGAATAGGAATTCTTATTGAGAAATCAATGGTAACCGAAAGTGATGGGCGTTTGAGGGTCCATGACATGCTTCAAGCAATGGGTAAGGAAATTGTTGTTCATGAATCACCAGATGATGCAGGCAAACGTAGTAGGATATGGTCCTCAGAGGATGCCATTCATGTGTTGGGAAATAAGAAGGGAACCGAAGCAATCCGTGGTATGGTGGTAAGATTTGACAAACCATATATCATACGTTTGGATCGTGAGGCTTTCTCAAGTATGAGCAATCTCAAGTTACTTGTCATGTCAAGTCATTCAAATTTGTCACAAGGCCAATTGAATCTTGAAGGACTTAACTGCCTTCCTAACACATTGAAAGTCATCGAATGGAAGGAGTATCCTTTAGACTTCCTACCAAGGCAAAATAAATTTCAAGAACTTGTTGATCTTAAAATGCAATACAGTACATTAAGAGAACTTTGGAGAGAAACTCAGTTTCTGCAAAGTTTGAAGTTCATTGATTTGAGTCATTCAACAAACCTGATCAGAACACCAAATTTTAATAATACTCCTAATCTTCAAAGATTAATTCTTAAAGGGTGTACAAAGCTTGTTGAAGTTCACCACTCTCTCTGGCAACACAGGAATCTTGTCATTGTTGATTTTAAAGGTTGCAAAAGTATTAAGAATCTTCCAACCAAATTGGAGATGAATTCTTTAGAGACACTAGTTCTCTGTGGTTGTTCAAAAGTTAAAAAACTTCCTGAGTTTGGTGAAGGTATGGAACGTTTATCCAAGCTTGATTTAGAGAGCACTGCTATATCCAAACTACCACAATCATTGGTCAATTTGATTGGTCTTATTATATTAAATTTAAAGGATTGCAAAAATCTGGTTTGCCTCCCAAGTGATTTTCAAAAACTGAAAGCTATAAAGATTATCAATATTTCTGGTTGCTCAAGGATTTCAAGGCTTCCGGAGAATTTGAATGAAAATGATTCATTGGAAGAGCTTGATGTTGGTGAAACTGCTATAAGAGAAGTGCCTTCATCCTTGAATAATTTAAAAGTATTATCTCTTAGGGGATGTAAGGGCCATCAAGTTCAACAAAGTCGTTCCCTTCTCAAGCTGGCATTTAGGCTTCAAAGGCCACCAAGTTCAACAAACTCTTTGTGGTCTCCTTCTTTTTCAAATCTATCATCTTTGGGCAATTTACGTCTAAGTTATTGCAATCTTCATGATGACTCACTGTCCAGCGGAATTAGCAATTTATCATCACTGAAAGTGTTGGATTTGTGTGGAAACAATTTTGTTGAATTTCCTTCTGGCCTCATTTCCAAACTTGAAGAGCTTGAATGTATTACTTTGAATGATTGCCCAAGCCTTCAGTCTTTGCCTCAAGTTCCAGCAAACCTATCAATTATAGAAGCAGTTGATTGTCCATCATTGAAACATTATGTTCGTTCCCAGCAACTATGGGAATTCATTGAGCAATTTGAATATCAGACTCGATGTAGACTTGAAATCTCCGGTCAAAAATGGAAATGTCACTGTTTAAGCGACTACATGTCTGCAATTATAACTTGGGATTCACAAGTTTCTGACTTTATGCAACCGACTCGAGTATTAACTATTCCTGGTAGTGAAGTGCCACCATGGTTTCACCATCAAAACTATTCTTGTGCGGAAGATTGCCCCTATGAGTATACTCCAAAAAATGCGTCAATTAAAGTAAAAACTCCTGATTCTTGCCGTTCAGGTGAATGGTGGGGTGTGGCTGTATGCTTAGTGCTTGAAAATGATTTGGAATTTGCAAATTGCCGTGACAACGTTTATTGGACTTATAAAGTTTCTAAAGGTAAATACTCAAATTCATTCCGTTGTTGTGGCATTCATGTGCAGTCTAATTGTCGTCATCAACGATGTATCATCTACATTCGTTTTTCTTCATTTGTTGTGGAGCAACTTCAAATGGTATTCTTCACCAATAACGAAGGTCCAGAGAAGAAGTCAGCTTTTAAAATAGCACAGTGTGGGTGGCGTGTGTTGTGTAAAGAAGATGTTGAGAGATGGCAAAATACAAGAGATGAAGAATGA 2136 0.3736 MAKDDVIQILESCGLHAKIGIGILIEKSMVTESDGRLRVHDMLQAMGKEIVVHESPDDAGKRSRIWSSEDAIHVLGNKKGTEAIRGMVVRFDKPYIIRLDREAFSSMSNLKLLVMSSHSNLSQGQLNLEGLNCLPNTLKVIEWKEYPLDFLPRQNKFQELVDLKMQYSTLRELWRETQFLQSLKFIDLSHSTNLIRTPNFNNTPNLQRLILKGCTKLVEVHHSLWQHRNLVIVDFKGCKSIKNLPTKLEMNSLETLVLCGCSKVKKLPEFGEGMERLSKLDLESTAISKLPQSLVNLIGLIILNLKDCKNLVCLPSDFQKLKAIKIINISGCSRISRLPENLNENDSLEELDVGETAIREVPSSLNNLKVLSLRGCKGHQVQQSRSLLKLAFRLQRPPSSTNSLWSPSFSNLSSLGNLRLSYCNLHDDSLSSGISNLSSLKVLDLCGNNFVEFPSGLISKLEELECITLNDCPSLQSLPQVPANLSIIEAVDCPSLKHYVRSQQLWEFIEQFEYQTRCRLEISGQKWKCHCLSDYMSAIITWDSQVSDFMQPTRVLTIPGSEVPPWFHHQNYSCAEDCPYEYTPKNASIKVKTPDSCRSGEWWGVAVCLVLENDLEFANCRDNVYWTYKVSKGKYSNSFRCCGIHVQSNCRHQRCIIYIRFSSFVVEQLQMVFFTNNEGPEKKSAFKIAQCGWRVLCKEDVERWQNTRDEE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4187g00006 711 SUPERFAMILY L domain-like 95 498 - -
Pral4187g00006 711 SUPERFAMILY "Winged helix" DNA-binding domain 9 75 IPR036390 -
Pral4187g00006 711 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 117 280 - -
Pral4187g00006 711 Gene3D Ribonuclease Inhibitor 274 514 IPR032675 -
Pral4187g00006 711 Gene3D Ribonuclease Inhibitor 96 270 IPR032675 -
Pral4187g00006 711 SMART LRR_typ_2 274 297 IPR003591 -
Pral4187g00006 711 SMART LRR_typ_2 437 460 IPR003591 -
Pral4187g00006 711 Coils Coil 701 711 - -
Pral4187g00006 711 Pfam Leucine Rich Repeat 160 178 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4187g00006 Pral-Chr4187 127343 129874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4187g00006 3 371 WRKY Transcription Factor Family AT4G12020 34.456 8.86e-56 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4187g00006 - - pcin:129318967 642.499