Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4187g00004 ATGTCAAGCCGTAAAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACACAAGCCAACTTCAGAATTTGGCTGGAAAAGGATGGTTTGGCATAGGGAGTAGAATAATAATAACAACTAGAGATCAACGTCTGTTACTTGAGTATGGTGTTTCTCAGTATAAGATGAATTTCTTAAATCAAGTTGAGTCCTGTCAACTTTTTCTTCAAAAAGCATTTAAGGGAGATCAACCAAATGGAGATTTTTTGGAGCTTTCTAAAGTTTTGATCAATGCTGCCAACGGACTTCCATTGGCACTCAAAGTGCTTGGCTCATTTCTTTGTGGAAGAAATAAACCAGAATGGAAGGAAGTACCCAAGAAGATTCCTTCAAATGGCATTTTTGATATACTAAATGTGAGCTTTGATGGATTGCAATATAATGAGAAGAATACATTCTTAGATATTGCTTGCTTTTTCAATGGGATGACCAAGTATGAAATCATAGAAATTTTAGAAAATAGTGGTCTGTGCCCAAAAATTGGAATTGGTGTTCTTATAGAGAAATCATTAGTAACTGAAGTGAAAGGATACTTGAGGATGCATGATATGCTTCAAGAAATGGCTAACGAAATTGCTTTTTGTAAATCACCCGATGATGCCGGAAAGCATAGTAGGATATGGTCCTTGGAAGATGCTAATCATGTGTTGGCAAATAAGATGGGAACTGAAGCAATCTGTGGTATAGTGGTGAATTTTTACAAACCATGTGTCATACAATTGAATCCTGAAGCCTTCTTTAGGTGTAAAGTCATTGTTGATTTGAAAAGTTGCAAAAGTATTAAAACTCTTCCAACCACATTGGAGATGAAGTGTTTGGAGAAATCTATTCTCTCTGGTTGTTCAAAAGTTAAAAGGCTTCCTAAGTTTGGTAAATGTATGGAATGCTTATTGGAGCTTGATTTAGAAGGGACTGCTATATCCAAACTACCTGAATCATTGGTCAATTTGAGTGGTCTTGCTGTGTTGAATTTAAGTCTAGATGTAGTCATCAACGATGTATCATCCACATTCGCTTTTCCTCGTTTGTTGGGAAACAACTTCAAATGGTATTTTTCACTAAGATTCACAATCCCAGAAATCATCCACCCACCATCACAATCTCCATCTCTGCACACTTGGGTTTCTCCGTCTTCTCCATTCCATCTCTCGATTCGGCCCGATTCTTCCACTGATTCCGCATCCTCCGTCGCGTTCTGCCATGGCGGCTGTGACTATGAAAACATTCGGTGGGGCTTCCACGGAGCAGAGGCGGGGGCTAGGCGTTCGATCTCTCAGGGCAGTGGGCTAGTGGCTGGAGCTCGGAGCTTATAG 1350 0.3963 MSSRKKVLLVLDDVSDTSQLQNLAGKGWFGIGSRIIITTRDQRLLLEYGVSQYKMNFLNQVESCQLFLQKAFKGDQPNGDFLELSKVLINAANGLPLALKVLGSFLCGRNKPEWKEVPKKIPSNGIFDILNVSFDGLQYNEKNTFLDIACFFNGMTKYEIIEILENSGLCPKIGIGVLIEKSLVTEVKGYLRMHDMLQEMANEIAFCKSPDDAGKHSRIWSLEDANHVLANKMGTEAICGIVVNFYKPCVIQLNPEAFFRCKVIVDLKSCKSIKTLPTTLEMKCLEKSILSGCSKVKRLPKFGKCMECLLELDLEGTAISKLPESLVNLSGLAVLNLSLDVVINDVSSTFAFPRLLGNNFKWYFSLRFTIPEIIHPPSQSPSLHTWVSPSSPFHLSIRPDSSTDSASSVAFCHGGCDYENIRWGFHGAEAGARRSISQGSGLVAGARSL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4187g00004 449 Gene3D - 57 138 IPR042197 -
Pral4187g00004 449 Gene3D - 1 50 IPR027417 -
Pral4187g00004 449 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 338 IPR044974 GO:0006952
Pral4187g00004 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 148 IPR027417 -
Pral4187g00004 449 SUPERFAMILY "Winged helix" DNA-binding domain 126 229 IPR036390 -
Pral4187g00004 449 PRINTS Disease resistance protein signature 1 14 - -
Pral4187g00004 449 PRINTS Disease resistance protein signature 92 106 - -
Pral4187g00004 449 PRINTS Disease resistance protein signature 280 296 - -
Pral4187g00004 449 Pfam NB-ARC domain 4 126 IPR002182 GO:0043531
Pral4187g00004 449 SUPERFAMILY L domain-like 253 348 - -
Pral4187g00004 449 Gene3D Ribonuclease Inhibitor 250 385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4187g00004 Pral-Chr4187 86431 91183 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4187g00004 264 337 WRKY Transcription Factor Family AT5G45050 35.135 8.56e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4187g00004 - - pcin:129317383 384.8