Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4187g00002 ATGGCACTTGAAGCTCATGGAGTTGAGTATTCTTCAAGCTGTTCTCGTTCATACAGGAAGCACAAGCATGATGTGTTTTTAAGCTTTCGAGGAGAAGACACTCGCAAGACATTTACAGACCACTTATATGCTGCTTTGTGTGACAATCGACTGATAACCCTTAGGGACGAAGAAGAACTGGAAAGGGGAGAAGTTATCAACCTGAGTTTGAATCAAGCAATTGAAGACTCTTTATCTGCAATTGTTGTACTCTCTAAAAACTATGCTTCTTCCAGATGGTGTTTAAATGAGCTCCTAAAGATCCTTCATTTTAAGAAAGAGCTGGGCCTTCATGTATTTCCAATCTCTTATGGCATAGACCCATCTGATGTTCGGCATCAAAGAGGAAGTTTTGAAGAAGCCTTTGTAAAGCATGAACAAAAATTTGCACATAACGAAGTGCAAAGATGGAGGGATGCTTTAAAGGAAGTTGCTAACATAGCTGGCTGGAACTCCCAAGATTATCGATATGAAATAGAACTCGTTGATTTGGTTGCTGAAAAAGTGATGAGGTCAAAATTAAATGATGAACTGCCGTTTGACTTAGATGATGGTGAACTGGTTGGAATTGATGTAAAAATAGCAGAATTTGAGTCAGTTCTGTCAAATACATCGGAGGAAGTTCAATTTATAGGAATATGGGGAATGGGAGGGTTAGGCAAAACTACTCTTGCTAAAATTGTTTATGAGAGAATATACAAAAACTACGAAGTTCATTTCTTTCTTCATAATGTTAGAGAGAAGTCTGCAAAAGAAGGTGGTTTACTTTCATTGCAACATAAACTTCTTTCTCATTCGAAAAGAAGAAATCATATGGAAGTGCGTGATTGTGACGAAGGAAAAATGCTGATAAAAAAAAAAAGGTGGTGTAATACCAAAGTTCTACTTGTCCTTGATGATGTGAGTCTAATAAGCCAACTTGAGAATTTGGCTGGAAAGAAAGAATGGTTTGGTCAAGGGAGAAGAATAATAATAACAACTAGAGATCAGCGTCTTTTAGTTGAGCATGGTGTTTCTCAATATAAGATGAATTTCTTAAGTCAAGTCGATTCCCATCAACTTTTTCTTCAAAAAGCTTTCAAGGAAGATCAACCAAATGAACATTATTTGGAGCTTTCTAAAACTGTGATTAAATCTGCCAAAGGACTTCCTTTGGCACTCAAAGTATTTGGTTCATTTCTTTGTGGAAGAAGTGAATCAGAATGGGAGGATGCGCTTAGGAAGGTTCCTCCAAATGGCATTTTGGAGATACTTAAAGTGAGCTTTGATGGACTAGAATATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGGATGGCTAAGGATGATGTCATACAAATCTTAGAAAATTGTGGTCTTTGA 1413 0.3673 MALEAHGVEYSSSCSRSYRKHKHDVFLSFRGEDTRKTFTDHLYAALCDNRLITLRDEEELERGEVINLSLNQAIEDSLSAIVVLSKNYASSRWCLNELLKILHFKKELGLHVFPISYGIDPSDVRHQRGSFEEAFVKHEQKFAHNEVQRWRDALKEVANIAGWNSQDYRYEIELVDLVAEKVMRSKLNDELPFDLDDGELVGIDVKIAEFESVLSNTSEEVQFIGIWGMGGLGKTTLAKIVYERIYKNYEVHFFLHNVREKSAKEGGLLSLQHKLLSHSKRRNHMEVRDCDEGKMLIKKKRWCNTKVLLVLDDVSLISQLENLAGKKEWFGQGRRIIITTRDQRLLVEHGVSQYKMNFLSQVDSHQLFLQKAFKEDQPNEHYLELSKTVIKSAKGLPLALKVFGSFLCGRSESEWEDALRKVPPNGILEILKVSFDGLEYNEKNIFLDIACFFNGMAKDDVIQILENCGL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4187g00002 470 Pfam TIR domain 22 202 IPR000157 GO:0007165
Pral4187g00002 470 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 163 IPR035897 -
Pral4187g00002 470 PRINTS Disease resistance protein signature 223 238 - -
Pral4187g00002 470 PRINTS Disease resistance protein signature 393 407 - -
Pral4187g00002 470 PRINTS Disease resistance protein signature 301 315 - -
Pral4187g00002 470 Gene3D - 15 184 IPR035897 -
Pral4187g00002 470 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Pral4187g00002 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 449 IPR027417 -
Pral4187g00002 470 Gene3D - 358 439 IPR042197 -
Pral4187g00002 470 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Pral4187g00002 470 Pfam NB-ARC domain 214 427 IPR002182 GO:0043531
Pral4187g00002 470 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 466 IPR044974 GO:0006952
Pral4187g00002 470 SMART till_3 22 160 IPR000157 GO:0007165
Pral4187g00002 470 Gene3D - 185 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4187g00002 Pral-Chr4187 38904 40794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4187g00002 199 470 WRKY Transcription Factor Family AT5G45050 35.379 1.62e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4187g00002 - - pcin:129318967 474.937