Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4185g00005 ATGCAGCATAGGAATATTGTAAGGTTACAGGATGTAGTACACAGTGAGAAGAGTTTGTATCTGGTTTTTGAGCACCTGGACTTAGATCTGAAGAAGCACATGGATTCATCTCCTGATTTTGCTAAAGATCATCGACAAATAAAAATGTTTCTATATCAAATTCTGTGTGGCATTGCTTACTGTCATTCACATAGGGTTCTTCATAGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGCAATAATTCAGTAAAGCTTGCAGATTTTGGATTGGCCAGGGCATTTGGCATTCCTGTCAAGACATTTACACATGAGGTGGTGACACTATGGTACAGAGCTCCAGAAATATTGCTTGGATCTCGCCATTACTCGACCCCAGTGGATGTTTGGTCTGTGGGCTGTATATTTGCAGAGATGGTAAACCTAAGACCACTGTTTCCTGGAGACTCTGAGATTGATGAAATATTTAAAATATTCAGTATCATGGGTACACCAAATGTGGATATGTGGCCCGGAGTGATTTCATTGCCCGATTTTAAAACATCCTTTCCCAAGTGGCCGCCAAAGGACCTGGCAACTGTTGTTCCAAATCTTGGGCCAGCTGGCATTGATCTTCTTTCTAACATGCTATGCTTGGATCCCAGCAAAAGAATTACAGCCAGGAATGCTCTTGAGCATGAGTACTTTAAGGACATCAAATTTGTACCCTAA 714 0.4132 MQHRNIVRLQDVVHSEKSLYLVFEHLDLDLKKHMDSSPDFAKDHRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRNNSVKLADFGLARAFGIPVKTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNLRPLFPGDSEIDEIFKIFSIMGTPNVDMWPGVISLPDFKTSFPKWPPKDLATVVPNLGPAGIDLLSNMLCLDPSKRITARNALEHEYFKDIKFVP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4185g00005 237 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4185g00005 237 Gene3D Phosphorylase Kinase; domain 1 1 27 - -
Pral4185g00005 237 Pfam Protein kinase domain 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4185g00005 237 FunFam Cell division control protein 2 homolog 29 235 - -
Pral4185g00005 237 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Pral4185g00005 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Pral4185g00005 237 Gene3D Transferase(Phosphotransferase) domain 1 29 235 - -
Pral4185g00005 237 PANTHER CELL DIVISION PROTEIN KINASE 2 230 - -
Pral4185g00005 237 SMART serkin_6 2 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4185g00005 Pral-Chr4185 297313 307396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4185g00005 1 237 Core Cell Cycle Gene Families AT3G48750 79.325 4.29e-144 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pral4185g00005 Pkinase 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4185g00005 K02206 - qsa:O6P43_013208 448.358