Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4182g00001 ACATGGATTTCTGCTTTCTTCTTCATCTTCTTCTTCGCTTCAGTTTCTCCCGGAGCAGAGTCCAGTTGCAGCAAGGGTTGTGATCTTGCTCTAGGTTCTTACTACGTTTGGCCAGGTTCCAATCTCTCATTCATCACACAACAAGTGCGATCCCAGATTCTGACAGACGAAAACGACATCATCAGCTACAACAAAGACCAAACAATCAGCAGAGATTATGTCCAATCCACTACAAGAATCAACATCCCGTTTCCATGTGATTGTCTTGAAGATGGATATCTGGGTCATATGTTTCGGTACGAGATTAACCGAGGGGATACCTACAAGACTATTGCTGAGACGTACTATTCCAATTTGACTACGGTTGAGTTACTGAGGAAGTTCAATGGCGACACAATACCTGCAAGTGGAACACTTAATGTTGCTGTTAATTGTTCTTGTGGTAACAGCGAAGTATCAAAGCTCTATGGATTGTTCATCACATGGCCACTTAGGCCTGAGGATACTTTGGAATCAATTGCCAGTAATGAGAAGCTTGACGCTGGGTTGCTGCAGAGGTATAATCCTGGTGTGAATTTCAGCCAAGGGAGCGGATTGGTTTATATACCAGGCAAAGATCAAAATGGCATCTACGTTCCAATGGAGTCTAGTTCCAGAGCAGGTCTGTCTGGCGGGGTTATTGCTGGAATATCTATTGGCGTCGTAGCTGGACTTCTGCTGTTGGCAGCTTCTATATATTTTGGATATTTCCGAAAGAAAATGGCTGAAACAAAATTAATCTCTCAAGAGTTCCAAGAGTTCACTGTTGAAGAAGAGAAGGGATATGGTGGTCCTACTGGCATCACAGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTACTGCCACCAATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAGAGAATTTCTAGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCGCTTAATTGGATATTGCACTGAGAACTCTCTTTTCCTGGTTTATGAATACATTGATAATGGAAACTTAAGTCAACATCTGCGTGGCACAGGAAGAGATCCGCTGCCATGGTCTACCCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGCCTTGAATATATTCACGAGCATACAGTTCCTGTGTATATCCACCGTGACATAAAGTCGGCAAATATATTGATAGATAACAGCTTCCATGGGAAGGTTGCAGATTTTGGATTAACTAAACTGGCTGAAGTGGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCGCCAGAATATGCTCAGTATGGTGATGTCTCTCCTAAGGTTGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCCGCCAAGGAAGCCATCGTCAAGACAACTCAATCTGATGCTGACTCAAAGGGCCTTGTAGCAATGTTTCATGGAGTTCTTAATCAGCCTGCTCCTACGGAAGATCTTCGCAAATTGGTTGACCCAAGGCTGGGGGATGACTACCCTATTGACTCAGTTTTGAAAATGGCTCAACTTGCAAAAGCATGCACACAAGAAAATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTGCTCTCATGACACTTCATTCTTCCACTGCTGATGATTGGGACGTTGGTGCCTTGTACAATAATCCCAATCTCATGAATCTGATGTCGGGAAGATAA 1806 0.4308 TWISAFFFIFFFASVSPGAESSCSKGCDLALGSYYVWPGSNLSFITQQVRSQILTDENDIISYNKDQTISRDYVQSTTRINIPFPCDCLEDGYLGHMFRYEINRGDTYKTIAETYYSNLTTVELLRKFNGDTIPASGTLNVAVNCSCGNSEVSKLYGLFITWPLRPEDTLESIASNEKLDAGLLQRYNPGVNFSQGSGLVYIPGKDQNGIYVPMESSSRAGLSGGVIAGISIGVVAGLLLLAASIYFGYFRKKMAETKLISQEFQEFTVEEEKGYGGPTGITVDKSVEFSYEELATATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTENSLFLVYEYIDNGNLSQHLRGTGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDNSFHGKVADFGLTKLAEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTTQSDADSKGLVAMFHGVLNQPAPTEDLRKLVDPRLGDDYPIDSVLKMAQLAKACTQENPQLRPTMRSIVVALMTLHSSTADDWDVGALYNNPNLMNLMSGR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4182g00001 601 FunFam PTI1-like tyrosine-protein kinase 3 372 586 - -
Pral4182g00001 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Pral4182g00001 601 CDD STKc_IRAK 307 569 - -
Pral4182g00001 601 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 586 IPR044812 GO:0019199|GO:0045087
Pral4182g00001 601 SMART serkin_6 301 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4182g00001 601 SUPERFAMILY Protein kinase-like (PK-like) 283 572 IPR011009 -
Pral4182g00001 601 Gene3D Transferase(Phosphotransferase) domain 1 372 587 - -
Pral4182g00001 601 Pfam Protein tyrosine and serine/threonine kinase 303 571 IPR001245 GO:0004672|GO:0006468
Pral4182g00001 601 FunFam LysM receptor kinase 2 280 371 - -
Pral4182g00001 601 Gene3D Phosphorylase Kinase; domain 1 286 371 - -
Pral4182g00001 601 ProSiteProfiles Protein kinase domain profile. 301 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4182g00001 601 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4182g00001 Pral-Chr4182 2795 9392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4182g00001 6 601 Receptor kinase-like Gene Family AT3G21630 57.630 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4182g00001 PK_Tyr_Ser-Thr 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4182g00001 K13429 - gmx:100777781 820.076