Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4181g00013 ATGATAACCAGATTTGGGTTTCCACTCCTTTTGTTGTTGTTATTTTCCCTTTGTTTCAACGCAGAATCGAAGTGCAAGAAACGATGCAACTTGGCTTTAGCCTCCTACTATATTTCAGACCAATTAGACAATCTTACCCAACTTTCGAAGATTATGCAATCCCGGGTTCTTGAAAGGGCTGAGGATATCGTCAGCTATAACACAGGCATACTAACTAGCCAAGACTACATCCCAAGGAACATTCGAGTGAACGTTCCGTTCCCTTGCGATTGCATCGATGGGGCAGATCCAGGTTACGTATTTAAGTACCCAATGCAGAAAGAAGACACCTATACGAAGATTGCGAATCAGACCTACTCCAATTTGACCACAGCTTCGGAGTTGCAGAGCCGCAATGGCTATTCGCCGAACAATATTCCTGATTCTGTTACGCTCGATGTGGCGGTGAACTGTTACTGTGGGGATAGCCACGTTTCGAAACAGTATGGTTTGTTTATCACTTACCCACTCAGAGCTGAGGATTCGCTGGAATCAATTGCGAACCAGACGAAGATTGATCAGGAGTTGCTGCGGAAGTATAATCCTGGTGCTGATTTCAACAAGGGAAGTGGTCTGGTGTTTATACCAGGAAAAGGCCAAAATGACGTTAATGTGCCAATGGCCCCAAGCACGAAAGGTCTAAAAGGTGGGGCTATTGCTGGATTATCTGCTGGAGCAGTAGTTGGCGTTCTCTTATTGGCTGCTTGTATTTGTGTCGTATGTTACCAAAAGAAGGGGGAGGAGGAGGAGCAAAAGTTGGTAACAATTTACTCTTCTCAACCGGGTAGAGATTCGAGTGGTCCTCCTGCTTCTGTCGATACCAACAACAATGGCCTGACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTCAAGCCACAAATAACTTCTGTCTCGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCCGTCTACTACGCAGAGCTGAGAGGAGAGAAAGCTGCAATAAAGATGATGGAGTCGCAAAAATCAAAACAGTTTATTGCTGAATTGAAAGTTTTAACACATGTTCATCACCTAAACCTGGTACGCTTGATTGGATATTGTGCTAAGAAGGATTCTCTTTTCCTTGTGTATGAATACATCGACAACGGAAACTTAAGCCAACATCTGCGGGATTCAGGGAGAGAAACGTTGCCATGGTCTACGCGTTTGCAAATTGCTCTGGATTCTGCCAGAGGTCTTGAATACATTCACGAGCATACACGGCCTGTATATATTCATCGTGACATAAAGCCAGCTAATATATTGATAGATAAAAACTTCTGTGCAAAGGTTGCCGATTTTGGGTTGACGAAACTCATTGAAGTGGGAAGTTCATCAATTCCCACTGGTAATATTGCAGGCACATTTGGTTACATGCCACCCGAATATGCATATGGTAGTGTTTCACCAAAAATCGATGTCTATGCCTTCGGGGTTGTTCTTTATGAACTTATATCTGCTAAAGAAGCTGTGTTGAGGGTTGGTGAAGCCGGTTCTGGAATAACAAAAGGCCTTGTCTCTTTGTTTGATGAAGCTCTTGAGCAGCCTAATCCTAAAGAACATCTCCAAAAGCTTATTGATCCTAGGCTTGGAGACCAATATTCAATCGACTCAGTTTACGAGGTGGCGCAAGTAGCCAAAATGTGCACACAGGGAGACCCAGAGAGACGTCCAAGTATGAGATCTATTGCAGTGTCTCTGATGACACTTTCTTCTACTTCTGTGGAATGGCATATTGCCTCCTTGCAAGAAAATCCAACACTTGCAAATATGATGCCTGGAAGGCACAGTTAG 1845 0.4374 MITRFGFPLLLLLLFSLCFNAESKCKKRCNLALASYYISDQLDNLTQLSKIMQSRVLERAEDIVSYNTGILTSQDYIPRNIRVNVPFPCDCIDGADPGYVFKYPMQKEDTYTKIANQTYSNLTTASELQSRNGYSPNNIPDSVTLDVAVNCYCGDSHVSKQYGLFITYPLRAEDSLESIANQTKIDQELLRKYNPGADFNKGSGLVFIPGKGQNDVNVPMAPSTKGLKGGAIAGLSAGAVVGVLLLAACICVVCYQKKGEEEEQKLVTIYSSQPGRDSSGPPASVDTNNNGLTVDKSVEFSYEELAQATNNFCLANKIGQGGFGAVYYAELRGEKAAIKMMESQKSKQFIAELKVLTHVHHLNLVRLIGYCAKKDSLFLVYEYIDNGNLSQHLRDSGRETLPWSTRLQIALDSARGLEYIHEHTRPVYIHRDIKPANILIDKNFCAKVADFGLTKLIEVGSSSIPTGNIAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISAKEAVLRVGEAGSGITKGLVSLFDEALEQPNPKEHLQKLIDPRLGDQYSIDSVYEVAQVAKMCTQGDPERRPSMRSIAVSLMTLSSTSVEWHIASLQENPTLANMMPGRHS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4181g00013 614 Gene3D Phosphorylase Kinase; domain 1 284 383 - -
Pral4181g00013 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Pral4181g00013 614 SMART serkin_6 312 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00013 614 ProSiteProfiles Protein kinase domain profile. 312 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00013 614 MobiDBLite consensus disorder prediction 270 290 - -
Pral4181g00013 614 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 598 IPR044812 GO:0019199|GO:0045087
Pral4181g00013 614 Pfam Protein tyrosine and serine/threonine kinase 314 582 IPR001245 GO:0004672|GO:0006468
Pral4181g00013 614 ProSitePatterns Protein kinases ATP-binding region signature. 318 339 IPR017441 GO:0005524
Pral4181g00013 614 FunFam PTI1-like tyrosine-protein kinase 3 384 598 - -
Pral4181g00013 614 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Pral4181g00013 614 FunFam LysM receptor kinase 2 291 383 - -
Pral4181g00013 614 Pfam LysM domain 171 196 IPR018392 -
Pral4181g00013 614 Gene3D Transferase(Phosphotransferase) domain 1 384 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4181g00013 Pral-Chr4181 170370 181576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4181g00013 11 612 Receptor kinase-like Gene Family AT3G21630 53.698 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4181g00013 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4181g00013 - K13429 gmx:100803042 733.021