Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4181g00011 ATGATAACCAGATTTGGGTTTCCACTCCTTTTGTTGTTGTTATTTTCCCTTTGTTTCAACGCAGAATCGAAGTGCAAGAAACGATGCAACTTGGCTTTAGCCTCCTACTATATTTCAGACCAATTAGACAATCTTACCCAACTTTCGAAGATTATGCAATCCCGGGTTCTTGAAAGGGCTGAGGATATCGTCAGCTATAACACAGGCATACTAACTAGCCAAGACTACATCCCAAGGAACATTCGAGTGAACGTTCCGTTCCCTTGCGATTGCATCGATGGGGCAGATCCAGGTTACGTATTTAAGTACCCAATGCAGAAAGAAGACACCTATACGAAGATTGCGAATCAGACCTACTCCAATTTGACCACAGCTTCGGAGTTGCAGAGCCGCAATGGCTATTCGCCGAACAATATTCCTGATTCTGTTACGCTCGATGTGGCGGTGAACTGTTACTGTGGGGATAGCCACGTTTCGAAACAGTATGGTTTGTTTATCACTTACCCACTCAGAGCTGAGGATTCGCTGGAATCAATTGCGAACCAGACGAAGATTGATCAGGAGTTGCTGCGGAAGTATAATCCTGGTGCTGATTTCAACAAGGGAAGTGGTCTGGTGTTTATACCAGGAAAAGGCCAAAATGACGTTAATGTGCCAATGGCCCCAAGCACGAAAGGTTGGCCTTCTCTCTTTTCAGAAAGTTGCTTACTTGATGAATGCGTTGGTCTAAAAGGTGGGGCTATTGCTGGATTATCTGCTGGAGCAGTAGTTGGCGTTCTCTTATTGGCTGCTTGTATTTGTGTCGTATGTTACCAAAAGAAGGGGGAGGAGGAGGAGCAAAAGTTGGTAACAATTTACTCTTCTCAACCGGGTAGAGATTCGAGTGGTCCTCCTGCTTCTGTCGATACCAACAACAATGGCCTGACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTCAAGCCACAAATAACTTCTGTCTCGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCCGTCTACTACGCAGAGCTGAGAGGAGAGAAAGCTGCAATAAAGATGATGGAGTCGCAAAAATCAAAACAGTTTATTGCTGAATTGAAAGTTTTAACACATGTTCATCACCTAAACCTGGTACGCTTGATTGGATATTGTGCTAAGAAGGATTCTCTTTTCCTTGTGTATGAATACATCGACAACGGAAACTTAAGCCAACATCTGCGGGATTCAGGGAGAGAAACGTTGCCATGGTCTACGCGTTTGCAAATTGCTCTGGATTCTGCCAGAGGTCTTGAATACATTCACGAGCATACACGGCCTGTATATATTCATCGTGACATAAAGCCAGCTAATATATTGATAGATAAAAACTTCTGTGCAAAGGTTGCCGATTTTGGGTTGACGAAACTCATTGAAGTGGGAAGTTCATCAATTCCCACTGGTAATATTGCAGGCACATTTGGTTACATGCCACCCGAATATGCATATGGTAGTGTTTCACCAAAAATCGATGTCTATGCCTTCGGGGTTGTTCTTTATGAACTTATATCTGCTAAAGAAGCTGTGTTGAGGGTTGGTGAAGCCGGTTCTGGAATAACAAAAGGCCTTGTCTCTTTGTTTGATGAAGCTCTTGAGCAGCCTAATCCTAAAGAACATCTCCAAAAGCTTATTGATCCTAGGCTTGGAGACCAATATTCAATCGACTCAGTTTACGAGGTGGCGCAAGTAGCCAAAATGTGCACACAGGGAGACCCAGAGAGACGTCCAAGTATGAGATCTATTGCAGTGTCTCTGATGACACTTTCTTCTACTTCTGTGGAATGGCATATTGCCTCCTTGCAAGAAAATCCAACACTTGCAAATATGATGCCTGGAAGGCACAGTTAG 1893 0.4369 MITRFGFPLLLLLLFSLCFNAESKCKKRCNLALASYYISDQLDNLTQLSKIMQSRVLERAEDIVSYNTGILTSQDYIPRNIRVNVPFPCDCIDGADPGYVFKYPMQKEDTYTKIANQTYSNLTTASELQSRNGYSPNNIPDSVTLDVAVNCYCGDSHVSKQYGLFITYPLRAEDSLESIANQTKIDQELLRKYNPGADFNKGSGLVFIPGKGQNDVNVPMAPSTKGWPSLFSESCLLDECVGLKGGAIAGLSAGAVVGVLLLAACICVVCYQKKGEEEEQKLVTIYSSQPGRDSSGPPASVDTNNNGLTVDKSVEFSYEELAQATNNFCLANKIGQGGFGAVYYAELRGEKAAIKMMESQKSKQFIAELKVLTHVHHLNLVRLIGYCAKKDSLFLVYEYIDNGNLSQHLRDSGRETLPWSTRLQIALDSARGLEYIHEHTRPVYIHRDIKPANILIDKNFCAKVADFGLTKLIEVGSSSIPTGNIAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISAKEAVLRVGEAGSGITKGLVSLFDEALEQPNPKEHLQKLIDPRLGDQYSIDSVYEVAQVAKMCTQGDPERRPSMRSIAVSLMTLSSTSVEWHIASLQENPTLANMMPGRHS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4181g00011 630 Gene3D Phosphorylase Kinase; domain 1 300 399 - -
Pral4181g00011 630 ProSitePatterns Protein kinases ATP-binding region signature. 334 355 IPR017441 GO:0005524
Pral4181g00011 630 Gene3D Transferase(Phosphotransferase) domain 1 400 618 - -
Pral4181g00011 630 SUPERFAMILY Protein kinase-like (PK-like) 307 600 IPR011009 -
Pral4181g00011 630 MobiDBLite consensus disorder prediction 286 306 - -
Pral4181g00011 630 FunFam PTI1-like tyrosine-protein kinase 3 400 614 - -
Pral4181g00011 630 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00011 630 Pfam LysM domain 171 196 IPR018392 -
Pral4181g00011 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Pral4181g00011 630 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 614 IPR044812 GO:0019199|GO:0045087
Pral4181g00011 630 FunFam LysM receptor kinase 2 307 399 - -
Pral4181g00011 630 SMART serkin_6 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00011 630 Pfam Protein tyrosine and serine/threonine kinase 330 598 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4181g00011 Pral-Chr4181 170369 181576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4181g00011 11 628 Receptor kinase-like Gene Family AT3G21630 52.923 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4181g00011 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4181g00011 - K13429 gmx:100803042 725.317