Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4181g00010 ATGGAACCCAGATTGGGGTTTCCACTTCTCTTCTTATTGTTATTATCTATCTGTTTCAATGTGGAATCAAAGTGTCAGAAAGGATGCAACCTGGCTCTTGCCTCCTACTATGTTTGGGTTGGTTTTTTCAATCTCACGACGGTTTCGCAGATTATGCAATCCCCAATTCTTCAAAATCCTGAAGATATCGTCAGCTATAACAAAGGCCAACTGTCTACCCCAGACTATGTCCAAACTACCACTCGAGTGAACGTACCGTTCCCTTGCGATTGCATCGGTGGTGAATATCTAGGTTACGTATTCAAGTACCCGATTCAAACAGGGGACACATATATGAAGGTTGCGAATCAGAGCTATTCCAATCTAACCATTGCTTCGTGGTTGCAGAGCCACAATGGCTATCCGCCGAACAATTTTCCTAATTCTGGAACATTGAATGTGACGGTGAACTGTTCGTGGGGGGATAGCCACGTTTCGAGAGATTATGGGTTGTTCATCACGTACCTGCTTAGAGCTGAGGATTCTTTGGATTCAATTGCGAACCAGACGAATCTTGATCGATCGTTGCTGCAGAAGTATAATCCTGGTGTTAATTTTAGCAGAGGGAGTGGTGTGGTGTATATCCCCGGGAAAGGGCTAAAAGGCATAGGCATTGCAGGAGTATCTGCTCGAGCAATTGCTGGAATTCTGTTATTGACAGTTTGTCCGTATGTTGTGTATTACCAAAAGAAGAAGGAGAAAGAGGAAAAATTGCTTTCAGTATACGCTGCTCAACCTGGAAAGGATTCCAATGGTCCTCCTGCTCCTGCTGATACTAGCATCAAAGGTATTACTGTGGACAAATCAGTTGAGTTCTCATATGAAGAACTAGCTCAAGGCACAAATAACTTTGTTATGGAAAATAAAATTGGTCAAGGTGGTTTTGGGGCTATCTACTATGCAGAGCTGAGAGGCCAGAAAGCTGCAGTAAAAAAGATGGAGCCACAAAAATCAAGGGAGTTTCTTGCTGAATTGGAAGTGTTAACTTGTGTTCATCACCTAAACTTGGTGCGCTTGATTGGATATTGTGTTAAGAAGGATTCCCTTTTCCTTGTGTATGAATATATTGACAATGGAAACTTAAGCCAACACCTGCGAGATTCAGCTAGAGAACCCTTGCCATGGTCTGTGCGAGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCACGAGCATACTGTGCCAGTATATATTCATCGTGACATAAAGTCGGAAAATATATTGATAGACCAAAACTTTCGGGCTAAGGTTGCAGATTTTGGGTTGACCAAGCTCACTGAAGTGGGAAGTTCATCACTTCCCACTGAAAATTTTGCAGGCACATTTGGTTATATGCCACCTGAGTATGCTTATGGTAGTCTTTCGCCGAAAATTGACGTCTTTGCTTTTGGAGTTGTCCTATATGAACTTATATCTGCTAAAGAAGCTTTGTCCAGGGCTGGTGGAGCTGGTTCTGAAACAAAATCCCTTGTCTCTTTGTTTGAAGAAGTTCTTGAGAAGCCTAATCCAAAAGAACATCTTCAAAAGCTTGTTGATCCTAGGCTCGGTGATCAATACACAATCGATTCAGTTTACAAGGTTGCACAGCTAGCCAAAGTGTGCACAGATGGAGACCCAGACCGACGTCCAAGCATGAGATCTATTGTGGTGACTCTAATGACACTTTCTTCTTCTCCTTCTGTGGAATGGGACACTGCCTGCTTGTATGAAAATCCAACATACACAGAAATGTTGTTCGGAAGGCTGATGTAG 1800 0.4278 MEPRLGFPLLFLLLLSICFNVESKCQKGCNLALASYYVWVGFFNLTTVSQIMQSPILQNPEDIVSYNKGQLSTPDYVQTTTRVNVPFPCDCIGGEYLGYVFKYPIQTGDTYMKVANQSYSNLTIASWLQSHNGYPPNNFPNSGTLNVTVNCSWGDSHVSRDYGLFITYLLRAEDSLDSIANQTNLDRSLLQKYNPGVNFSRGSGVVYIPGKGLKGIGIAGVSARAIAGILLLTVCPYVVYYQKKKEKEEKLLSVYAAQPGKDSNGPPAPADTSIKGITVDKSVEFSYEELAQGTNNFVMENKIGQGGFGAIYYAELRGQKAAVKKMEPQKSREFLAELEVLTCVHHLNLVRLIGYCVKKDSLFLVYEYIDNGNLSQHLRDSAREPLPWSVRVQIALDSARGLEYIHEHTVPVYIHRDIKSENILIDQNFRAKVADFGLTKLTEVGSSSLPTENFAGTFGYMPPEYAYGSLSPKIDVFAFGVVLYELISAKEALSRAGGAGSETKSLVSLFEEVLEKPNPKEHLQKLVDPRLGDQYTIDSVYKVAQLAKVCTDGDPDRRPSMRSIVVTLMTLSSSPSVEWDTACLYENPTYTEMLFGRLM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4181g00010 599 Gene3D Transferase(Phosphotransferase) domain 1 369 582 - -
Pral4181g00010 599 FunFam PTI1-like tyrosine-protein kinase 3 369 582 - -
Pral4181g00010 599 Gene3D Phosphorylase Kinase; domain 1 270 368 - -
Pral4181g00010 599 Pfam Protein kinase domain 299 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00010 599 SMART serkin_6 297 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00010 599 FunFam LysM receptor kinase 2 276 368 - -
Pral4181g00010 599 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 581 IPR044812 GO:0019199|GO:0045087
Pral4181g00010 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Pral4181g00010 599 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Pral4181g00010 599 ProSiteProfiles Protein kinase domain profile. 297 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00010 599 SUPERFAMILY Protein kinase-like (PK-like) 276 568 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4181g00010 Pral-Chr4181 144774 157304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4181g00010 1 597 Receptor kinase-like Gene Family AT3G21630 53.045 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4181g00010 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4181g00010 K13429 - gmx:100803042 732.635