Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4181g00001 ATGATCACTCCCCGGCAAAACGCCGGAAAGTATTACCAATCACTTGACTTTCTCTTATCTTCAATGATCAATATTCGCTCGTTCGCACACCAATACAAATCAAAGTGTCAGAAAGGATGCAACCTGGCTCTTGCCTCCTACTATGTTTGGGTTGGTTTTTCCAATCTCACGACGCTTTCGCAGATTATGCAATCCCCAGTTCTTCAAATTCCTGAAGATATCGTCAGCTATAACAAAGGCCAACTATCTACCCGAAACTATGTCCAAACCACCACTCGAGTGAACGTTCCGTTCCCTTGCGATTGCATCGGTGGTGAATATCTAGGTTACGTATTCAAGTACCCAATTCAAACAGGGGACACATATGTGAAGGTTGCGAATCAGAGCTATTCCAATCTGACCACTGCTTCGTGGTTGCAGAGCCACAATGGCTATCGGCCGACTAATTTTCCTAATTCTGGAACATTGAATGTGACAGTGAACTGTTCGTGTGGGGATAGCCACGTTTCGAGAGATCATGGGTTGTTCATCACGTACCCGCTTAGAGCTGAGGATTCTTTGGATTCAATTGCGAACCAGACGAATCTTGATCGATCGTTGCTGCAGAAGTATAATCCTGGTGTTAATTTTAGCAGAGGGAGTGGTGTGGTGTATATCCCCGGGAAAGACAGTAATGGTGCCTATGTGCCCCTGCCCCCGAGCCCCAAAGGGCTAAAAGGCATCGGTATTGCTGGAGTATCTGCTGGAGCAATAGCTGGAATTCTGTTATTGATAGTTTGTCCGTATGTCGTGTATTACCGAAAGAAGAAGGAGGAAGAGGAAAAATTGCTTTCAGCATACGCTGCTCAACCTGGTAATGATTCCAATAGTCTTCCTGCTTCTGCTGATACTAGCATCAAAGGTATTACTGTGGACAAATCAGTTGACTTCTCATATGAAGAACTAGCTCAAGGCACAGATAACTTCGGTATGGGAAATAAAATTGGTCAAGGTGGTTTTGGGGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAGTAAAAAAGATGGAGTCACAAAAATCAAGGGAATTTCTTGCTGAATTGAAAGTGTTAACATGCGTTCATCACCTAAACCTGGTGCGCTTGATTGGATATTGTGTTAAGAGGGATTCTCTTTTCCTTGTGTATGAATATATTGACAATGGAAACTTAAGCCAACACCTGCGAGATTCAGGGAGAGAACCCTTGCCATGGTCTATGCGAGTGCAAATTGCTCTGGATTCAGCTAGAGGTCTTGAATACATTCACGAGCATACTGTGCCTATTTATATTCATCGTGACATAAAGTCGGCAAATATATTGATAGATCAAAACTTCCGGGCTAAGGTTGCAGATTTTGGGTTGACCAAGCTCACTGAAGTGGGAAGTTCATCACTTCCCACTGAAAATCTTGCAGGCACCTTTGGTTATATGCCACCTGAATTGCACAGCTAG 1479 0.4402 MITPRQNAGKYYQSLDFLLSSMINIRSFAHQYKSKCQKGCNLALASYYVWVGFSNLTTLSQIMQSPVLQIPEDIVSYNKGQLSTRNYVQTTTRVNVPFPCDCIGGEYLGYVFKYPIQTGDTYVKVANQSYSNLTTASWLQSHNGYRPTNFPNSGTLNVTVNCSCGDSHVSRDHGLFITYPLRAEDSLDSIANQTNLDRSLLQKYNPGVNFSRGSGVVYIPGKDSNGAYVPLPPSPKGLKGIGIAGVSAGAIAGILLLIVCPYVVYYRKKKEEEEKLLSAYAAQPGNDSNSLPASADTSIKGITVDKSVDFSYEELAQGTDNFGMGNKIGQGGFGAVYYAELRGEKAAVKKMESQKSREFLAELKVLTCVHHLNLVRLIGYCVKRDSLFLVYEYIDNGNLSQHLRDSGREPLPWSMRVQIALDSARGLEYIHEHTVPIYIHRDIKSANILIDQNFRAKVADFGLTKLTEVGSSSLPTENLAGTFGYMPPELHS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4181g00001 492 SUPERFAMILY Protein kinase-like (PK-like) 302 491 IPR011009 -
Pral4181g00001 492 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 24 490 IPR044812 GO:0019199|GO:0045087
Pral4181g00001 492 Gene3D Phosphorylase Kinase; domain 1 294 393 - -
Pral4181g00001 492 ProSiteProfiles Protein kinase domain profile. 322 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4181g00001 492 Pfam Protein tyrosine and serine/threonine kinase 324 490 IPR001245 GO:0004672|GO:0006468
Pral4181g00001 492 FunFam LysM receptor kinase 2 301 393 - -
Pral4181g00001 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Pral4181g00001 492 Gene3D Transferase(Phosphotransferase) domain 1 394 492 - -
Pral4181g00001 492 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Pral4181g00001 492 SMART serkin_6 322 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4181g00001 Pral-Chr4181 24181 32115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4181g00001 18 489 Receptor kinase-like Gene Family AT3G21630 56.823 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4181g00001 PK_Tyr_Ser-Thr 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4181g00001 K13429 - qlo:115955492 582.793