Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4179g00006 ATGGCACTTTATAATCATGGAGTTGAGTATTCTTCAAGCTTTTCTGGTTCAAACAGGAGGCACAAGTATGATGTGTTTTTAAGTTTTCGAGGAGAAGACACTCGTGAGTGTTTTACAGACCACTTATATGCTGCTTTGTGTCGCAATGAACTAATAACTTTTAGGGATGAGGAAGAGCTTGAAAGGGGAGAAGTTATTAACCTAAGTTTGCTTCAAGCAATTGAAGAATCTTTATGTGCAATTGTTGTACTCTCCGAAAACTATGCTTCTTCAAGATGGTGCTTAGATGAGCTCCTAAAGATCCTTCATTCTAAGAAAGAGTTGGGTCTTCATATATTTCCAATCTTTTATGGTATAGATCCATCCGATGTTCGGCATCAAAGAGGAAGATTTAAAAAGGCTTTTGAAGAGCTTGAACAAAAGTTTGCGCATGACAAAGTTTGCAAATGGAGGGATGCTTTAAAAGAAGTTGCAGACATATCTGGCTGGAACTCTAGATATTATAGGTACGAATCAAAACTCATTGAAAATGTTGCTGAAATTTTGAGGTCAAAATTAGATGATCAACGATCTTTCAACTCAAATGATGAAGGTGTGGTCAAAACTCACTTAAATGATGATCGATTAGTTGGTATTGATGCAAAGATAGCAGAGTTTGATTCATTTCTAGCCAATACATCGGAGGGAGTTCAGTTTATTGGAATATGGGGAATGGGAGGGTTAGGCAAAACAACTCTTGCTAGAGCTGTTTATAAGAGAATAAAAAAGAATTATGAAGTTCATTTCTTTCTTCATAATATCAGAGAGAAATCTGCACAAAATGGTGGGTTAATTGAATTGCAAAAGGAACTTCTTTCTCACCCGAAAAGAAGAACTAGAACGGAAGTCGGTAATTCTTACGATGGAAGAGAGTTAATAGGAAGGAAGTTGCGCAATACAAAAGTTCTACTTGTTCTTGATGATGTGAGTGACATAAACCAACTTGAGAATTTGGCTGGAAAGAAAGGATGGTTTGGCAAAGGGAGTAGAATAATAATAACAACCAGAGATAAGCATCTTTTAGTTCAGTATGGTGTTTCTCAATATAAGATGAATTTCTTAAGTCAAGATGAGTCCCGTCAACTTTTTCTTCAAAAAGCATTCAAAGGAGATCATCCAAATGGAGATTATTTGGAGCTTTCTAAAATTTTGATTAAATCTACCAAAGGACTTCCTTTGGCCCTCAAAGTATTCGGTTCATTTCTTTGTGGAAGAAGTAAATCAGAATGGGAGGATACCCTTAGTAAGGTTCCTCCAAATGACATTTTGGAGATACTTCAAGTAAGCTTTGATGGACTAGAATATAATGAGAAGACTATATTTTTAGATATTGCTTGCTTTTTCAATGGGGAGGCCAAGGATAATGTCATCCAAATTTTAGAAAATTGTGGTCTTCACCCAAGAATTGGAATACCGGTTCTTATTGAGAAATCATTGCTAACTGAATTTGAAGGGTGCTTGTGGGTGCATGACATGCTTCGAGAAATGGGTAAGAAAATTGTGTTTCTTGAATCACCAAATGATGCAGGCAAGCGTAGTAGGATATGGTCCTTGGAGGATGCTAATCATGTGTTAGGGAATAAGAGGGGGACTGAAGCAATCTATGGCATAGTGGTAAGATTTGACAAACCATATGCAATGCATTTCAACCCTGAAGCCTTTTCAAGTATGAGTAATCTCAAGTTACTTATGATATCAAGTCATTCACATTCACGCATGCAATTGAATCTCCTTCGTGGACTTAATTGCCTTTCAACCACATTGAAAGTCATAGAATGGGAGGGGTATCCTTTAGATTTCTTGCCAAGTCAGACTCAACTGAATGAACTTGTTGATCTTAGAATGCAACACAGCAAATTGAAAGAACTTTGGACGGGAACTCAGTTTCTACAAAGTTTGAAGTTCATTGATTTGAGTCATTCAACAAATCTTATCAGAACACCAAATTTTGATGGAACTCCTAATCTTCAAAGATTGATTCTTGAAGGGTGTACAAAGCTTGTTGAAGTTCACTACTCTCTAGGGCAACACAAGAAACTTGTCATTGTTGATTTTAAAGGTTGCAAAAGTATTAAAACCCTTCCAACCAAAATCGAGATGAATTGCTTAGAGTTGTTTATTCTCTCTGGTTGTTCAAAAATTAAGAAACTTCCTGAGTTTGGTAAAGGTATGGAACATTTATCGTTGCTTGATTTAGAGGAGACTGCTATATCAAAACTGCCTCAATCATTCGTCAATTTGATTGGTCTTGCAATATTAAATTTAGCGAATTGCAAAAATCTGGTTTGCCTTCCAAGTGATTTTCAAAAATTGAAAGCTATAAAGAACATCAATATTTCTGGTTGTCCAAAGTTTTCAAGGCTTCCAGAAAATTTGAACGAAAATGAGGCATTGGAAGACCTTGATGTGAGTGGAACTGCTCTAAAAGAAGTGCCTTCATCCCTCCGTAATCTAAGAGTATTGTCTCTTAGCCGATGCAGTGGTTATTCACAATCATCATCATCATCATCATCATGGGATCTCTACTCCCTTCCCAAGCGGGCATTTAGGCTTCAAAGGCCTTCAACAATGTTTTCAGGGTCTCCTTTTTCAAACCTATCATCTTTGGTCACGTTACATTTAAGTTATTGCAATCTTCATGATGAATCACTATCCAATGAAATCAGCAGTTTATCTTCATTGACGGCATTAGATCTGAGTGGAAACAACTTTGTTGAATTTCCTTCCGGCCTCATTTCCAAACTTCGAAAACTTGAATCTATTGGTTTAAATAATTGCCCAAGGCTCCAGTCTTTGCCTCAACTTCCAAAAAACCTGTCGATTATACAAGCTGGTGATTGTCCATCATTGAAACATTATGCATGTTCACAACAATTATGGGAATTCATTGAGCACTTCGAATCTCAGACTCGACTACGCCGAAGTGAAATCTCAGGTCATGACTGGAAATGTCACTTTTTAAGCGACTATGTGTCTGCCATTGTAACTTGGGATTCAGAATTTTCTGACTTCTTTATGCAACCTACTCGCTTATTAACTATTCCTGGTAATGAAGTGCCATCATGGTTTCACAATCAAAGCTATTATTGTGCGAAAGATTTCCCTTATGAGTATACTCCAACAAATGTGTCATTCACAATAGAACTGCCTGATTCATGCCGATCAAGTGAATGGTGGGGCATAGCCGTATGCTTAGTGCTAGAACATGATTTGGAAGCTGCAGAATTTGATGATGCTGGCGTCCTTTGTTGGACTTATAGAGTTTCTGAAGATGAATATTCAAATTCATTTCGTTGTTGTAGCATTTGTGTGCAGTCTAGTTGTCGTCATCAACGATGTATCATCTACATTCGTTCTTCCTCATTTGTTGTGGAACAACCACTTCAAATGGTATTTTTCATTTACAACAAAGGTGAACAGAAGAAGTCAATTTTTAAAATAGAACAGTGTGGGTGGCGTGTATTGTGTAAAGAAGACGTTGAAAGGTGGCGAAACACGAGAGATGAAGGATACAGCAGTACAAATAATGATCAGTTCATTGTTGAAGAAGATGAGTCTATCACCAGTGCAGAGCCTATAGCTAGCCGATCAGACCAGAGGGAGTTGAGATTGTGCCTCAATATCCTATGGCCCATTATGCTTTTTTTATTTATTATGTTTATCTCTATTGTATTTATAATTGAGATTATAGGATATATTATTTATCGGCCAAGTTATTTTTTCTAG 3765 0.3697 MALYNHGVEYSSSFSGSNRRHKYDVFLSFRGEDTRECFTDHLYAALCRNELITFRDEEELERGEVINLSLLQAIEESLCAIVVLSENYASSRWCLDELLKILHSKKELGLHIFPIFYGIDPSDVRHQRGRFKKAFEELEQKFAHDKVCKWRDALKEVADISGWNSRYYRYESKLIENVAEILRSKLDDQRSFNSNDEGVVKTHLNDDRLVGIDAKIAEFDSFLANTSEGVQFIGIWGMGGLGKTTLARAVYKRIKKNYEVHFFLHNIREKSAQNGGLIELQKELLSHPKRRTRTEVGNSYDGRELIGRKLRNTKVLLVLDDVSDINQLENLAGKKGWFGKGSRIIITTRDKHLLVQYGVSQYKMNFLSQDESRQLFLQKAFKGDHPNGDYLELSKILIKSTKGLPLALKVFGSFLCGRSKSEWEDTLSKVPPNDILEILQVSFDGLEYNEKTIFLDIACFFNGEAKDNVIQILENCGLHPRIGIPVLIEKSLLTEFEGCLWVHDMLREMGKKIVFLESPNDAGKRSRIWSLEDANHVLGNKRGTEAIYGIVVRFDKPYAMHFNPEAFSSMSNLKLLMISSHSHSRMQLNLLRGLNCLSTTLKVIEWEGYPLDFLPSQTQLNELVDLRMQHSKLKELWTGTQFLQSLKFIDLSHSTNLIRTPNFDGTPNLQRLILEGCTKLVEVHYSLGQHKKLVIVDFKGCKSIKTLPTKIEMNCLELFILSGCSKIKKLPEFGKGMEHLSLLDLEETAISKLPQSFVNLIGLAILNLANCKNLVCLPSDFQKLKAIKNINISGCPKFSRLPENLNENEALEDLDVSGTALKEVPSSLRNLRVLSLSRCSGYSQSSSSSSSWDLYSLPKRAFRLQRPSTMFSGSPFSNLSSLVTLHLSYCNLHDESLSNEISSLSSLTALDLSGNNFVEFPSGLISKLRKLESIGLNNCPRLQSLPQLPKNLSIIQAGDCPSLKHYACSQQLWEFIEHFESQTRLRRSEISGHDWKCHFLSDYVSAIVTWDSEFSDFFMQPTRLLTIPGNEVPSWFHNQSYYCAKDFPYEYTPTNVSFTIELPDSCRSSEWWGIAVCLVLEHDLEAAEFDDAGVLCWTYRVSEDEYSNSFRCCSICVQSSCRHQRCIIYIRSSSFVVEQPLQMVFFIYNKGEQKKSIFKIEQCGWRVLCKEDVERWRNTRDEGYSSTNNDQFIVEEDESITSAEPIASRSDQRELRLCLNILWPIMLFLFIMFISIVFIIEIIGYIIYRPSYFF 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4179g00006 1254 Pfam TIR domain 22 193 IPR000157 GO:0007165
Pral4179g00006 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 457 IPR027417 -
Pral4179g00006 1254 Gene3D - 20 193 IPR035897 -
Pral4179g00006 1254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 778 IPR044974 GO:0006952
Pral4179g00006 1254 Pfam Leucine Rich Repeat 623 641 IPR011713 -
Pral4179g00006 1254 SMART LRR_typ_2 737 759 IPR003591 -
Pral4179g00006 1254 SMART LRR_typ_2 828 864 IPR003591 -
Pral4179g00006 1254 SMART LRR_typ_2 904 927 IPR003591 -
Pral4179g00006 1254 SMART LRR_typ_2 879 903 IPR003591 -
Pral4179g00006 1254 Gene3D - 199 361 IPR027417 -
Pral4179g00006 1254 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Pral4179g00006 1254 SUPERFAMILY "Winged helix" DNA-binding domain 434 538 IPR036390 -
Pral4179g00006 1254 SMART till_3 22 160 IPR000157 GO:0007165
Pral4179g00006 1254 PRINTS Disease resistance protein signature 309 323 - -
Pral4179g00006 1254 PRINTS Disease resistance protein signature 401 415 - -
Pral4179g00006 1254 PRINTS Disease resistance protein signature 232 247 - -
Pral4179g00006 1254 PRINTS Disease resistance protein signature 641 657 - -
Pral4179g00006 1254 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 163 IPR035897 -
Pral4179g00006 1254 Gene3D Ribonuclease Inhibitor 864 1013 IPR032675 -
Pral4179g00006 1254 SUPERFAMILY L domain-like 558 956 - -
Pral4179g00006 1254 Gene3D - 366 447 IPR042197 -
Pral4179g00006 1254 Pfam NB-ARC domain 223 431 IPR002182 GO:0043531
Pral4179g00006 1254 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Pral4179g00006 1254 Gene3D Ribonuclease Inhibitor 713 843 IPR032675 -
Pral4179g00006 1254 Gene3D Ribonuclease Inhibitor 560 712 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4179g00006 Pral-Chr4179 68574 76684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4179g00006 23 834 WRKY Transcription Factor Family AT4G12020 31.340 6.13e-98 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4179g00006 - - pcin:129318967 1160.59