Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4178g00007 ATGGCTGCCAAGAAGTGCTCTCTGCTGAAGGAAGTCAATGACTCAACTGACAGATGGAGAATTACAGTTCGTGTGATCAGGAGGTGGAATGTCTACAAGAAGGAGTCTCCTACTGAGGTTTTTTGTGTGTCCATGCTACTGATAGACGAAGAGGGGACAAGAATCCAAGCTTCTATCATGAACAAAAACCTATTTGATTGTTTTAGTGCCATGGCAGTGGAAGGGATAACTTATTTTATGGCTAATTTCGTCGTCTCTCCAAATAATAAGGAGTACAGGGCAACAAACCATGCTTTCAAACTGACACTAGGTACTTACACATATGTGAAGGAAGTACTTGCCCAAATACCTGAATACTCTTATCATTTCTTCCCTATTCGTGACATAATTAAGATGAAGGAGAGCAACCATGTTGACTATCTTATTGATGTCATTGGATTCGTTGCATCAATTGGGCATCTAGAGGAGTACAAGTCTAACAATGAGATCAAGAACAAATTGAGATGTTGCTGGTAG 516 0.4031 MAAKKCSLLKEVNDSTDRWRITVRVIRRWNVYKKESPTEVFCVSMLLIDEEGTRIQASIMNKNLFDCFSAMAVEGITYFMANFVVSPNNKEYRATNHAFKLTLGTYTYVKEVLAQIPEYSYHFFPIRDIIKMKESNHVDYLIDVIGFVASIGHLEEYKSNNEIKNKLRCCW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4178g00007 171 Gene3D - 114 169 IPR012340 -
Pral4178g00007 171 Pfam Domain of unknown function DUF223 45 131 IPR003871 -
Pral4178g00007 171 CDD RPA1_DBD_A_like 20 101 - -
Pral4178g00007 171 Gene3D - 4 111 IPR012340 -
Pral4178g00007 171 SUPERFAMILY Nucleic acid-binding proteins 9 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4178g00007 Pral-Chr4178 307648 308361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4178g00007 9 151 Core DNA Replication Machinery Family AT5G08020 29.333 1.19e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4178g00007 - - pcin:129300509 152.14