Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4178g00005 ATGGATGGAACTGGAGACAAAACAGCAGACTTGTTTCATGGCCAAGCCCAATTGTACAGACTCATGCATCTTTGGATGTCTTCTTTATGTCTAAAGTGTGCAATTGAGCTTGAAATACCGGACATAATCCACAAGCAAGGCCAACCCATCTCTCTTTCTCAGTTGGTATCAGATCTCAAAGTTCCACCCTCTAAAACTACTTTTATAAAAGGGCTCATGCGCTTGCTGGCTCACAATGGCCTCTTCACCATCATCAAAAGCAGCAACAATGAAGAAGAAGAAAGTGAAGTATCATATGATCTCACTTCTGCATCGCAGCTTCTTGTGAACGGCATAGACCATTGTATATCTTCAATGGTTCAGTTGACTGTAAGCCCAGCTTTGCTTGATTTGTATCAAAACTTGGGGAAATGGGTTCGTGGGGAGGAAAATACATTGAGAGAGACATCGTTTGGCGTAGGCGTTTATGAATTCCTTACTCAAAACCCAGAAGATTTGGCGGTCTTCCTAGAAGCAATGGCTAGTGATTCCAGATTCATGAAACTGGCAATGAAAGATTTGGGATCTGTTTTTGATGGACTGAATTCCATCGTTGATGTTGGCGGTGGAACTGGTACAGCTGCTATGATTATTTGTGAAGCATTCCCCAAGTTGAAATGTACGGTGCTCGATCTTCCTGAGGTTGTCTCAAACTTATCTGGAAACTGCAATATGAGCTTTGTTAGTGGGGACATGCTCAAATCCATCCCTCATGCTGATGCAGTGCTGATTAAGTGGGTTTTACATGACTGGGGTGATGATGATTGCTTAAAGATACTTAAAAATGCCAAGGAAGCTATTTCAGGCAATGGAAAAGGGGGAAAAGTGATCATCATAGATACAGTGTTGAATGAAAAGCAAGAGCAGCATGAAGTGCTAGAAACAAAGCTCTTACTCAACATAATGTTGGCGGCTGAATTCAATTCAAAAGAGAGATCCGAGGAAGAATGGAAGAAACTCTTCCTGAAAGCAGGCTTCACAGATTACCAGATATTTCCTGTATTCGGCTTTAGGCCTCTCATTGTGCTTCATCCCTAG 1077 0.4215 MDGTGDKTADLFHGQAQLYRLMHLWMSSLCLKCAIELEIPDIIHKQGQPISLSQLVSDLKVPPSKTTFIKGLMRLLAHNGLFTIIKSSNNEEEESEVSYDLTSASQLLVNGIDHCISSMVQLTVSPALLDLYQNLGKWVRGEENTLRETSFGVGVYEFLTQNPEDLAVFLEAMASDSRFMKLAMKDLGSVFDGLNSIVDVGGGTGTAAMIICEAFPKLKCTVLDLPEVVSNLSGNCNMSFVSGDMLKSIPHADAVLIKWVLHDWGDDDCLKILKNAKEAISGNGKGGKVIIIDTVLNEKQEQHEVLETKLLLNIMLAAEFNSKERSEEEWKKLFLKAGFTDYQIFPVFGFRPLIVLHP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4178g00005 358 CDD AdoMet_MTases 197 296 - -
Pral4178g00005 358 Gene3D Vaccinia Virus protein VP39 110 358 IPR029063 -
Pral4178g00005 358 FunFam O-methyltransferase ZRP4 110 358 - -
Pral4178g00005 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 354 IPR029063 -
Pral4178g00005 358 Pfam O-methyltransferase domain 132 339 IPR001077 GO:0008171
Pral4178g00005 358 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Pral4178g00005 358 Gene3D - 2 108 IPR036388 -
Pral4178g00005 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Pral4178g00005 358 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
Pral4178g00005 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
Pral4178g00005 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 358 IPR016461 GO:0008168
Pral4178g00005 358 PANTHER O-METHYLTRANSFERASE 24 342 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4178g00005 Pral-Chr4178 284510 285756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4178g00005 29 344 Monolignol Biosynthesis Gene Families AT5G54160 28.793 2.08e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4178g00005 K22588 - gmx:100818724 382.489