Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4178g00004 ATGAGCAATCTCAAGTTACTTGTCATGTCAAGTCATTCACATTTGTCACAAGGCCAATTGAATCTTGATGGACTTAACTGCCTTCCTAACACATTGAAAGTCATCGAATGGAAGGAGTATCCTTTAGATTTCCTACCAAGGCAAAATCAATTTCATGAACTTGTTGATCTTAAAATGCAATACAGCACATTAAAAGAACTTTGGAGAGAAACTCAGTTTCTGCAAAGTTTGAAGTTCATTGATTTGAGTCATTCAGCAAACCTGATCAGAACACCAAATTTTGATAAAACTCCTAATCTTCAAAGATTAATTCTTAAAGGGTGTACAAAGCTTGTTGAAGTTCACCACTCTCTCTGGCAACACAGGAATCTTGCCATTTTTGATTTTAAAGGTTGCAAAAGTATTAAGAATCTTCCAACCAAATTCGAGATGAATTCTTTAGAGACACTAGTTCTCTCTGGGTGTTCAAAAGTTAAAAAACTTCCTGAGTTTAGAGAAGGTATGGAATGTTTATCCAAGCTTGATTTAGAGAGCACTGCTATATCCAAACTACCACAATCATTGGTCAATTTGACTGGTCTTATTATATTAAATTTAAAGGATTGCAAAAATCTGGTTTGCTTCCCAAGTGATTTTCAAAAACTGAAAGCTATAAAGAATATCAATATTTCTGGTTGCTCAAGGATTTCAAGGCTTCCAGAGAATTTGAATGAAAATGATTCATTGGAAGAGCTTCATGTGGGTGAAACTGCTACAAGAGAAGTGCCTTCATCCTTGAATAATTTAAAAGTATTATCTCTTAGGGGATGTAAGGGCCATCAGGTTCAACAAAGTCGTTCCCTTCTCAAGGTGGCATTTAGGCTTCAAAGGCCACCAAGTTCAACAAACTCTTTGTGGTCTCCTTCTTTTTCAAATCTATCATCTTTGGGCAATTTACGTCTAAGTTATTGCAATCTTCATGATGACTCACTGTCCAGTGGAATTAGCAATTTATCATTACTGAAAGTGTTGGATTTGTGTGGAAACAATTTTGTTGAATTTCCTTCTGGCCTCATTTCCAAACTTGAAAAGCTTGAATGTATTACTTTGAATGATTGCCCAAGCCTTCAGTCTTTGCCTCAAGTTCCAGCAAACCTATCAATTATAGAAGCAGTTGATTGTCCATCATTGAAACATTATGTTCGTTCCCAGCAACTATGGGAATTCATTGAGCAATTTGAATATCAGGTGAATGGTGGGTGTGGCCATATGCTTAGTGCTTGA 1263 0.3618 MSNLKLLVMSSHSHLSQGQLNLDGLNCLPNTLKVIEWKEYPLDFLPRQNQFHELVDLKMQYSTLKELWRETQFLQSLKFIDLSHSANLIRTPNFDKTPNLQRLILKGCTKLVEVHHSLWQHRNLAIFDFKGCKSIKNLPTKFEMNSLETLVLSGCSKVKKLPEFREGMECLSKLDLESTAISKLPQSLVNLTGLIILNLKDCKNLVCFPSDFQKLKAIKNINISGCSRISRLPENLNENDSLEELHVGETATREVPSSLNNLKVLSLRGCKGHQVQQSRSLLKVAFRLQRPPSSTNSLWSPSFSNLSSLGNLRLSYCNLHDDSLSSGISNLSLLKVLDLCGNNFVEFPSGLISKLEKLECITLNDCPSLQSLPQVPANLSIIEAVDCPSLKHYVRSQQLWEFIEQFEYQVNGGCGHMLSA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4178g00004 420 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 144 274 - -
Pral4178g00004 420 Gene3D Ribonuclease Inhibitor 1 144 IPR032675 -
Pral4178g00004 420 Gene3D Ribonuclease Inhibitor 145 283 IPR032675 -
Pral4178g00004 420 Gene3D Ribonuclease Inhibitor 284 407 IPR032675 -
Pral4178g00004 420 Pfam Leucine Rich Repeat 54 72 IPR011713 -
Pral4178g00004 420 SUPERFAMILY L domain-like 9 273 - -
Pral4178g00004 420 SUPERFAMILY L domain-like 220 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4178g00004 Pral-Chr4178 275724 277504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4178g00004 1 265 WRKY Transcription Factor Family AT4G12020 32.482 8.10e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4178g00004 - - pcin:129317383 422.935