Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4178g00003 ATGGAAGTGCGTGATTGTGACGAAGGAAAAATGCTGATAAAAAAAAGGTGGTGTAATACCAAAGTTCTACTTGTCCTTGATGATGTGAGTCTCATAAGCCAACTTGAGAATTTGGCTGGAAAGAAAGAATGGTTTGGTCAAGGGAGTAGAATAATAATAACAACTAGAGATCAGCGTCTTTTAGTTGAGCATGGTGTTCCTCAATATAAGATGAATTTCTTAAGTCAAGTCGATTCCCATCAACTTTTTCTTGAAAAAGCTTTCAAGGAAGATCAACCAAATGAACATTATTTGGAGCTTTCTAAAACTGTGATTAAAGCTGCCAAAGGATTTCCTTTGGCACTCAAAGTATTTGGTTCATTTCTTTGTGGAAGAAGTGAATCAGAATGGGAGGATGCGCTTAGGAAGGTTCCTCCAAATGGCATTTTGGAGATACTTAAAGTGAGCTTTGATGGACTAGAATATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGGATGGCTAAGGATGATGTCATACAAATCTTAGAAAGTTGTGGTCTTTGCGCAAAAATTGGAATAGGAATTCTTATTGAGAAATCAATGGTAACCGAAAGCGATGGCTGTTTGAGGGTCCATGATGCTTCAAGAAATGGGTAA 651 0.3671 MEVRDCDEGKMLIKKRWCNTKVLLVLDDVSLISQLENLAGKKEWFGQGSRIIITTRDQRLLVEHGVPQYKMNFLSQVDSHQLFLEKAFKEDQPNEHYLELSKTVIKAAKGFPLALKVFGSFLCGRSESEWEDALRKVPPNGILEILKVSFDGLEYNEKNIFLDIACFFNGMAKDDVIQILESCGLCAKIGIGILIEKSMVTESDGCLRVHDASRNG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4178g00003 216 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 212 IPR044974 GO:0006952
Pral4178g00003 216 PRINTS Disease resistance protein signature 108 122 - -
Pral4178g00003 216 PRINTS Disease resistance protein signature 16 30 - -
Pral4178g00003 216 Gene3D - 74 154 IPR042197 -
Pral4178g00003 216 Pfam NB-ARC domain 19 142 IPR002182 GO:0043531
Pral4178g00003 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 164 IPR027417 -
Pral4178g00003 216 Gene3D - 1 73 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4178g00003 Pral-Chr4178 274770 275420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4178g00003 12 211 WRKY Transcription Factor Family AT5G45050 41.463 4.37e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4178g00003 - - pcin:129317383 296.204