Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4173g00008 ATGGGATTGTCATCAGAATACAGAGTTTTAGCTTTGCTTGGTTTGGTAATTTCCTTTGTGGGTTTGTTAGCAGCAGAAAGTGGTAAAAATGGGTCAATGAATGTGAGAAGTTACATTACTTGGGATGATTTGACGGTGGACGAGAATGGCTTAGCTTCAAAATCTAAAAGTGATGTACAGGTTATTGTGGTTGACCAGAATGGAAATGGCGATTCATCTACAGTTCAAGGGGCTGTGGATATGGTGCCAGATCAGAACTCACAGAGGGTGAAGATATACATTTCCCCTGGAACTTACAGAGAAAAGGTGTTTGTACCAAAGAACAAGCCATATGTCTCATTCATAGGGAAAAGAAATCAAACGCATGGTGTTGTGATTACTTGGAACAGCAAGTCATCAGACATTGGGTCAAATGGCCAAGAACTAGGGACTTACGGTTCAGCAACAGTGGCCGTAGAATCTAATTACTTCTGTGCAAATAGGATCACTTTCGAGAACTCTGTGGTTGCAGAGGCTGGTGGACATGGAATGCAGGGAGTAGCTTTGAGGGTAGATAGTGACAGAGCCATGTTCTACCAAGTTAGAATCTTGGGAACACAAGACACTCTTTTGGATAACACAGGAACTCATTATTTCCTCAAATGTTTCATCCAAGGAAAAATTGACTTCATTTGTGGCAGTGCAAAATCACTCTATGAGGATTGTCGTCTTAAGTCGACAGCCGATAGCTATGGAGCAATTGCAGCTCATCACAGGGATACGCCCAGTGAAGAAACAGGCTTCTCTTTCGTAGGCTGTTCAATCCAAGGAACTGGTAAGGTCTACCTTGGGAGAGCATGGGGAGACTACTCAAGAATCATATATTCAAACTGTCATATGGATGACATTATAATCCCACAAGGATGGACTGAATGGAATCACCCTTCCAGAAAGAAGACTGCACTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGATAGAAGTGGAAGAGTACCATGGTCAAAATCTTTCACTTTTGAGGAAGCAAGGCCTTTTCTGGACAGAAACTTCATAAATGGAGACAAATGGCTCAGATTGTAG 1083 0.4229 MGLSSEYRVLALLGLVISFVGLLAAESGKNGSMNVRSYITWDDLTVDENGLASKSKSDVQVIVVDQNGNGDSSTVQGAVDMVPDQNSQRVKIYISPGTYREKVFVPKNKPYVSFIGKRNQTHGVVITWNSKSSDIGSNGQELGTYGSATVAVESNYFCANRITFENSVVAEAGGHGMQGVALRVDSDRAMFYQVRILGTQDTLLDNTGTHYFLKCFIQGKIDFICGSAKSLYEDCRLKSTADSYGAIAAHHRDTPSEETGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSNCHMDDIIIPQGWTEWNHPSRKKTALFGEFQCQGKGADRSGRVPWSKSFTFEEARPFLDRNFINGDKWLRL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4173g00008 360 FunFam Pectinesterase 57 360 - -
Pral4173g00008 360 SUPERFAMILY Pectin lyase-like 61 358 IPR011050 -
Pral4173g00008 360 Pfam Pectinesterase 62 355 IPR000070 GO:0030599|GO:0042545
Pral4173g00008 360 Gene3D - 57 360 IPR012334 -
Pral4173g00008 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4173g00008 Pral-Chr4173 101180 102935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4173g00008 9 312 Carbohydrate Esterase AT5G55590 55.247 1.10e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4173g00008 K01051 - gmx:100813382 498.819