Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4172g00022 ATGGCCAGTAATGATGCAAGGGAGCCCTTGGTTCGACAATTACCAGACCTAGCAGCTCCAAAAACAAACGGCCAGGTTGGCAGGAGAAGGGTTCTCCGTTCTAGAAGTGCTCCTCTAGCTAATCTTGATCTACCTGAGAAAACTGATATTGGCTCAATTCAGCGTTCTGAGTCCATATTTGGGAAGTTACATCCAAGTTTTCTAAAGGTGGCTATATATCTTGTAGGGTATTTAAGTATTGGACTTGTGATCTTCTATCTTGTCAGGCACCAGATTGCAGGGAAGAAAACAGTGGGGTTCCTTGATGCTCTGTACTTCACAATTGTCACGATGACCACAGTTGGATACGGAGACCTTGTGCCAAATAGTGACCTTACAAAACTACTTGCCTGTGCTTTTGTATTCACAGGAATGGCACTAGTTGGTTTAATCTTAAGCAAAGCAGCGGACTACTTGGTTGAAAAGCAGGAAGTTTTGCTAGTCAAAGCTCTGCATAGGAAAGATAAAGTTGGTCCAACTGATATCCTAAAGGAGATTGAGGTCAACAAGACGATATATAAATTTTTTGTGGTACTTTCCCTGCTCTTAGCGCTCATTGTTACGGGGACAATTTTCTTAGTTGCTGTTGAGAAGTTGGATATTATCGATGCCTTCTATTGTGTTTGTTCTACAATAACAACCCTGGGTTATGGTGATAAAAGCTTTTCCAGTGAAGGAGGAAGAGTCTTTGCTGTGTTTTGGATATTGATGGGTACTATTTGTTTAGGTCAGCTTTTCCTTTACATTGCTGAGCTGAACACTGAAAAAAGACAAAAGGAAATCTCTAAGATGGTTCTTACACGGAGGACAACCAATGCAGACTTGGAGGCAGCAGATCTTGATGATGATGGAAATGTTGGGGTTGCTGAGTTCATTATCTATAAGCTCAAAGAGATGGGGAAGATAACTCAAGAAGATATCTCACTTGTAATGCAAGAGTTTGAGGAGCTTGATGTTGATCAGTCTGGTACTCTTTCACCTTCTGATATAGCTCTTGCTCAATCACCTCGTCCATCTTAG 1059 0.4145 MASNDAREPLVRQLPDLAAPKTNGQVGRRRVLRSRSAPLANLDLPEKTDIGSIQRSESIFGKLHPSFLKVAIYLVGYLSIGLVIFYLVRHQIAGKKTVGFLDALYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSKAADYLVEKQEVLLVKALHRKDKVGPTDILKEIEVNKTIYKFFVVLSLLLALIVTGTIFLVAVEKLDIIDAFYCVCSTITTLGYGDKSFSSEGGRVFAVFWILMGTICLGQLFLYIAELNTEKRQKEISKMVLTRRTTNADLEAADLDDDGNVGVAEFIIYKLKEMGKITQEDISLVMQEFEELDVDQSGTLSPSDIALAQSPRPS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4172g00022 352 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Pral4172g00022 352 SUPERFAMILY Voltage-gated potassium channels 166 265 - -
Pral4172g00022 352 MobiDBLite consensus disorder prediction 333 352 - -
Pral4172g00022 352 SUPERFAMILY Voltage-gated potassium channels 64 168 - -
Pral4172g00022 352 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Pral4172g00022 352 Gene3D - 64 162 - -
Pral4172g00022 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 98 322 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4172g00022 352 Pfam Ion channel 72 153 IPR013099 -
Pral4172g00022 352 Pfam Ion channel 194 265 IPR013099 -
Pral4172g00022 352 Gene3D - 172 292 - -
Pral4172g00022 352 FunFam Two-pore potassium channel 1 168 276 - -
Pral4172g00022 352 SUPERFAMILY EF-hand 284 344 IPR011992 -
Pral4172g00022 352 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4172g00022 352 PRINTS Two pore domain K+ channel signature 226 235 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4172g00022 Pral-Chr4172 170509 174120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4172g00022 59 348 Ion Channels AT5G55630 65.862 2.57e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4172g00022 K05389 - gmx:100777388 467.618