Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4170g00023 ATGCCTAACGGGAGCTTGGAGAATTGGTTATCAGCAAATGAACTTGGTGAACGTAGAGATTTATATATGAATTTTAGACAAAGATTGGATGCAGCCATTGATGTGGCTCATGCCTTGGATTATCTTCATCATGGTTTTGAGGAACCTATTGTTCATTGCGATATCAAGCCAAGTAATGTTCTTCCTAGTGATGATATGGTCGCACACTTAGGAGACTTTGGATTGGCTAGGCTTCTTCGTGAAATTACAAGCTGCTCTGGTGAGAACCAAACTACATCTTCAGCAATTAAGGGAACAATAGGCTATATTCCTCGAAAGTACGGCGAAAGTGGCCAAGTTACAACAAAAGGGGACATCTACAGCTATGGGATTCTTATGCTAGAGATGCTCACTGGAAAGAAGCCAACAGATGAAACGTTTCGTGAGGATCTAAGTCTACCCGAATTCTGCAAGCTAGCATTACCGGATGGAGTCCTTGAGATTGTGGATCCAAATTTGCTTGTTCTATCTGATAGAGATCATAGGAACGTTATGCGGAATTCAAACATGGAACGCCAAATTCAAGAGTCTCTAGCTAGCTTTGCTGGGATTGGTGTGGCATGCTGTGCAGGATTGCCTGGTGAAAGAATGGATATCAGAGATGTTTTGGCATAG 654 0.4235 MPNGSLENWLSANELGERRDLYMNFRQRLDAAIDVAHALDYLHHGFEEPIVHCDIKPSNVLPSDDMVAHLGDFGLARLLREITSCSGENQTTSSAIKGTIGYIPRKYGESGQVTTKGDIYSYGILMLEMLTGKKPTDETFREDLSLPEFCKLALPDGVLEIVDPNLLVLSDRDHRNVMRNSNMERQIQESLASFAGIGVACCAGLPGERMDIRDVLA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4170g00023 217 Pfam Protein kinase domain 2 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00023 217 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 216 - -
Pral4170g00023 217 Gene3D Transferase(Phosphotransferase) domain 1 1 217 - -
Pral4170g00023 217 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00023 217 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 217 - -
Pral4170g00023 217 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00023 217 SUPERFAMILY Protein kinase-like (PK-like) 1 216 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4170g00023 Pral-Chr4170 222909 224022 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4170g00023 1 215 Receptor kinase-like Gene Family AT3G47580 43.779 3.01e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4170g00023 Pkinase 6.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4170g00023 - - pvy:116111740 246.899