Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4170g00021 ATGAATTTTAGACAAAGATTGGATGTAGCTATTGATGTTGCTCATGCCTTGGATTATCTTCATCATGGTTTTGAGGAACCTATTGTTCATTGCGATATCAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTCGCACACTTAGGAGACTTTGGATTGGCTAGGCTTCTTCATGAAGTTACAAGCTACTCTGGAGAGAACCAAACTACACCTTCAGCAATTAAGGGAACAATAGGCTATATTCCTCCAGAGTACGGTGAAAGTGGCCAAGTTACAACAAAAGGGGACATCTACAGCTATGGGATTCTTATGCTAGAGATGCTCACTGGAAAGAAGCTAGCAGATAAAATGTTTCGTGAGGATCTAAGTCTACCCAAATTCTGCAAGCTAGCATTACCAGATGGAGTCCTTGAGATTGTGGATCCAAATTTTCTTGTTCTATCTGAATGA 450 0.4 MNFRQRLDVAIDVAHALDYLHHGFEEPIVHCDIKPSNVLLSDDMVAHLGDFGLARLLHEVTSYSGENQTTPSAIKGTIGYIPPEYGESGQVTTKGDIYSYGILMLEMLTGKKLADKMFREDLSLPKFCKLALPDGVLEIVDPNFLVLSE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4170g00021 149 SUPERFAMILY Protein kinase-like (PK-like) 2 121 IPR011009 -
Pral4170g00021 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00021 149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 28 40 IPR008271 GO:0004672|GO:0006468
Pral4170g00021 149 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 144 - -
Pral4170g00021 149 Pfam Protein kinase domain 9 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00021 149 Gene3D Transferase(Phosphotransferase) domain 1 1 148 - -
Pral4170g00021 149 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 149 - -
Pral4170g00021 149 SMART serkin_6 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4170g00021 Pral-Chr4170 215425 216580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4170g00021 5 145 Receptor kinase-like Gene Family AT3G47580 53.901 1.22e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4170g00021 Pkinase 7.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4170g00021 - - ccaj:109813865 201.445