Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4170g00020 ATGGCCACTAGCTCGGAGACTGACAGGCTTGCTTTGCTTTCTCTCAAGGATAAGTTCACCAATGGTGCTCCAAAAGCTCTACCTTCATGGAATGATTCTATCCATTTCTGCAAATGGCAAGGCGTTACATGCAGTTATCATCACATGAGAGTCTCAGCTTTGAACTTGACAAATCAAAATTTTAGAGGCATTGTTGCACCAGTATTAGGTAACCTAACATTTCTTAAACTACTCAATCTTTCGTATAATGAATTGCATGATCAAGTTCCCAAACAAATTGCCCATCTAAGACGACTGCAGTTTCTTGATTGGAGTAAAAATCATCTTGAGGAAGAAGTGCCTACAGAGTTGGCCAACTGTTCTAAACTCATGCAGATTTTCTTCTGTTACAATAATTTGATCGGTGAAATTCCCCCATGGTTTGGATCTATGCGACAACTTATAGAGTTGAGACTCAGTGATAATAAATTTCATGGGAATATTCCACCTTTCTTGGGAAATCTTTCATCCTTGGAGTGGTTGGCTCTTTCATATAATAATTTGGAAGGAAGTATACCTCAATCCCTAGGAGGGCTTTCAAATTTGCGGTTGCTCTATCTTGGTGCCAATAATCTTTCTGGTATAATCCCGTCTTCACTTTACAATCTTTCTCGCATGGAATTTTTAGATTTTCCTTTCAACTCCTTGTCTGGAACTATTCAATCAAATATTGGCCTTGCTTTCCCAAATCTTCGAGGGTTTAATGGAGGACACAACATGTTGATGGGAACTATTCGAGCTTCATTATCCAACATCTCTCAATTGCAATTATTTGCAATATATGAAAATGCTTTCAGTGGCCTAGTCCCTACCTCTTTGGGAAGACTACAGAACCTTAAGGATTTTGTGATTTACACAAATAATTTTGGGATTGAAAAAGGTCATGACCTAGATTTCCTCTCATCCTTGACAAATTGTAGTCAATTGCATTCAATGGTGGTGTCAGAAAATAATTTTAGTGGTGTATTGCCTAATTCAATTGGGAATCTCTCTTCCCAGCTTGAAATGCTTTATTTGAATTTCAATCATATCTTTGGAAGCATACCTAATGAGATTGGTCAATTAGACGGATTACTTACCCTTAGTTTCAAAGGTAACTCTCTTCAAGGAACAATTCCACATTCTATTGGAAAGCTTGAAAATCTTGGAAAGCTATACCTACACCAAAATCAATTAGCTGGTAGAATTCCTGATATCTTTGAAAATCTTACTAAGTTGATTGTCCTTTCATTGTATGACAATAATTTTGAGGGAACAATTCCAGTAAGCCTGAAACATTGTAAAGGTTTGCAATTCTTGTACATGGATCAAAATAACTTCAGCTGCACCATACCAAATCTGACTTTTGGTCATCTAGAAAGCTTAATATATCTTTACATGTCTTCCAATTCCTTGATTGGTCCCATTCCTTCTGTGATTGGTAACATGACGCAATTAGTGAGATTATATATGAGTGAAAACAATTTTTATGGTGATATTCCGACCGAACTTGGGGAATGCTTAGAATTAACAGATCTTGATATGAGCGGGAACTTCCTTCAAGGAAGTATCCCCTCATCCTTTAGTTCATTAAAATCCCTCATCAGATTAGACCTTTCCAATAATAACTTGTCAGGCACAATCCCTCGACAACTAAAAGATTTTCCAATATTGGAGACTTTGAACCTATCCCACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGTATTCGATAACATCACAGCTATTTTACTCGCGGGAAATGAGAAGCTTTGTGGTGGAATACCTCAATTAAAGCTGCCTAAATGCCCAAGTAAGTCTAAGAAGCATTTCAAAGTTATAATCCTTATCATTGTGATAAGCAGTGGTGCTCTTGCTTGTTTTGCAATTTGCCTAATCATTTGCATGAGAAGCAAACATAAAAAGTTGTCTTCTTCCACATCTTCCCCACCAAATGCTCAGTTGAGGATTTCTTATAAAGAGTTGCATGATGCAACTAATGGATTTTCATCATCCAATTTGGTTGGTGTAGGAAGCTTTGGTTCTATATATAAAGGAACTCTTCAGCACTTTGAGAGTTTTATTGCTGTAAAGGTGCTAAATTTGCAAGCACATGGGACAACAAAAAGTTTCATGACAGAATGCAAAACTATTAGTAAAGTCCATCATAGGAATCTTTTGAAGATTCTAACTACATGTTCAAGTGTTGATTACAAAGGCAATGATTTTAAGGCCCTTGTATTTGAGTTCATCCCTAATGGGAGCTTGGAGAATTGGTTATCAGTGAATGAACTTGGTGAACGTAGAGATTTATAG 2337 0.3693 MATSSETDRLALLSLKDKFTNGAPKALPSWNDSIHFCKWQGVTCSYHHMRVSALNLTNQNFRGIVAPVLGNLTFLKLLNLSYNELHDQVPKQIAHLRRLQFLDWSKNHLEEEVPTELANCSKLMQIFFCYNNLIGEIPPWFGSMRQLIELRLSDNKFHGNIPPFLGNLSSLEWLALSYNNLEGSIPQSLGGLSNLRLLYLGANNLSGIIPSSLYNLSRMEFLDFPFNSLSGTIQSNIGLAFPNLRGFNGGHNMLMGTIRASLSNISQLQLFAIYENAFSGLVPTSLGRLQNLKDFVIYTNNFGIEKGHDLDFLSSLTNCSQLHSMVVSENNFSGVLPNSIGNLSSQLEMLYLNFNHIFGSIPNEIGQLDGLLTLSFKGNSLQGTIPHSIGKLENLGKLYLHQNQLAGRIPDIFENLTKLIVLSLYDNNFEGTIPVSLKHCKGLQFLYMDQNNFSCTIPNLTFGHLESLIYLYMSSNSLIGPIPSVIGNMTQLVRLYMSENNFYGDIPTELGECLELTDLDMSGNFLQGSIPSSFSSLKSLIRLDLSNNNLSGTIPRQLKDFPILETLNLSHNHFYGEVPKGGVFDNITAILLAGNEKLCGGIPQLKLPKCPSKSKKHFKVIILIIVISSGALACFAICLIICMRSKHKKLSSSTSSPPNAQLRISYKELHDATNGFSSSNLVGVGSFGSIYKGTLQHFESFIAVKVLNLQAHGTTKSFMTECKTISKVHHRNLLKILTTCSSVDYKGNDFKALVFEFIPNGSLENWLSVNELGERRDL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4170g00020 778 Gene3D Ribonuclease Inhibitor 4 159 IPR032675 -
Pral4170g00020 778 FunFam Leucine-rich repeat receptor protein kinase EMS1 163 259 - -
Pral4170g00020 778 SUPERFAMILY L domain-like 4 302 - -
Pral4170g00020 778 FunFam Leucine-rich repeat receptor-like protein kinase 5 162 - -
Pral4170g00020 778 Gene3D Ribonuclease Inhibitor 308 619 IPR032675 -
Pral4170g00020 778 Pfam Leucine rich repeat N-terminal domain 6 45 IPR013210 -
Pral4170g00020 778 SUPERFAMILY Protein kinase-like (PK-like) 655 770 IPR011009 -
Pral4170g00020 778 FunFam LRR receptor-like serine/threonine-protein kinase EFR 308 616 - -
Pral4170g00020 778 SUPERFAMILY L domain-like 345 600 - -
Pral4170g00020 778 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Pral4170g00020 778 Gene3D Ribonuclease Inhibitor 160 307 IPR032675 -
Pral4170g00020 778 Pfam Protein tyrosine and serine/threonine kinase 680 770 IPR001245 GO:0004672|GO:0006468
Pral4170g00020 778 FunFam LRR receptor-like serine/threonine-protein kinase EFR 646 757 - -
Pral4170g00020 778 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Pral4170g00020 778 Pfam Leucine rich repeat 516 574 IPR001611 GO:0005515
Pral4170g00020 778 SMART LRR_typ_2 192 215 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 168 191 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 561 586 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 72 96 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 537 560 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 345 368 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 489 513 IPR003591 -
Pral4170g00020 778 SMART LRR_typ_2 392 415 IPR003591 -
Pral4170g00020 778 Gene3D Phosphorylase Kinase; domain 1 638 757 - -
Pral4170g00020 778 ProSiteProfiles Protein kinase domain profile. 676 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00020 778 PANTHER OS04G0122200 PROTEIN 76 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4170g00020 Pral-Chr4170 213319 215655 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4170g00020 4 774 Receptor kinase-like Gene Family AT3G47570 42.529 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4170g00020 PK_Tyr_Ser-Thr 1.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4170g00020 - - tcc:18585902 756.518