Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4170g00018 ATGATCCCCTACATTATTGCCACCAATTTTCTGCTATGCATAGCTTCTCAAATTCCGTTTCCAACTGAAGCTGCCGCTACTGGCTCAGAGACTGATCGGCTTGCTTTGCTTGCTCTCAAAGATAAGTTAACCAATGGTGTTTCAGAAGCCCTGCCTACGTGGAATGATTCTGTCCACTTCTGCAAATGGCAAGGCGTTACATGCGGTTCTCGTCACATAAGAGTCTCAGCTTTGAACTTGACAAGCCAAAATTTGGGGGGCACTATTGCACCAGCATTAGGTAACTTAACCTTTCTCAAACTGCTCAATCTTTCTCATAACAGATTACATGGTGAAGTTCCCAAACAAATTGGTTATCTTAAACAGTTACAAATTCTCCATTTGGGTGATAATAATCTCCGAGAGCTCCCGATAGAGCTGGCTAACTGTTCTAAGCTCCATCAAATTTTCTTTGGAATCAATAATTTGACTGGTAAAATCCCTTTCTGGTTTGGATCTATGCAACAGCTGACACTGTTGTCAATTCATACCAATGAATTTCTTGGCAATATTCCACCTTCCTTGGGAAATCTTTCATCCTTGGAGGTTTTGTCTCTTACATCCAATAATTTGGAAGGAAGTATACCTCAATCTCTAGGTGGGCTTTCAAATTTGCACAGGCTCGATCTTGGTAGCAATAATTTTTCTGGTATAATCCCTTCTTCACTTCACAATCTTTCTCGCATGGAAATTTTAAATTTTCTTTTCAACTCCCTGTCTGGAACTATTCCACTAAATATTGACCTTGCTTTCCCAAATCTTCGAAAGTTTAATGCGGGATACAACAGGTTGATGGGAACTATTCCAGCTTCATTATCCAACCTCTCTCAATTGCAACAATTTGCAATAAATGAAAATGCTTTTAGTGGCCTAGTCCCTACCTCTTTGGGAAGACTACAGAACCTTCAGAAGTTTGAGATTGCCGGAAATAATTTTGGGGGTGAACAAGGTCATGACCTGGATTTTCTCTCATCATTTACAAATTGTAGTCAATTGCAAGAGATAGAGATTTCATATAATAAATTTAGCAGTGTATTGCCAAATTCAATTGGGAATTTCTCTTCCCACCTTGAATGGCTTCATATGGGAGTCAATCGTATCATTGGAAGCATACCTAATGAGATTGGGCAATTAAACGGATTGATTTTCCTTGGTTTGCAACATAACTTGCTTCAAGGCACATTTCCACATTCAATTGGAAAGCTTGAAAATCTAGGAGAGCTATTTCTAGACCAAAATCAATTATCTGGTAAACTTCCTGATGTCTTTGGAAATCTTACTAAGCTGATTCAACTTTCTTTGTACAATAATAATTTGGAGGGAAGCATTCCATTAAGCCTCAAACATTGTGAAGGTCTGCAAATCTTGTACCTATTTCAAAATAACCTAAGCGGTCATATGCCAAAGCTAACTTTTGGTCACCTAGAAAGCTTAATACAGCTTGACTTGTATACCAATTCCTTGATTGGTCCCATTCCATCTGAGATTGGTAAAATGAAGCAATTAGTGAGATTAGATCTCAGTCAAAACAATTTTTCTGGTGATATTCCAACAGAACTTGGAGAGTGTTTACAGTTGACAGAACTTTATCTATATGAGAACCCCCTCCATGGAAGTATCCCCTCATCCTTTAGTTTCTTAAAATCTCTTATCATCTTAGACCTGTCCAATAACAATTTGTCAGGCACAATCCCGCAAGAACTAAAAGATTTTCCAATGCTGGAGATTGTGAACCTATCTCACAACCATTTTCATGGTGAGGTTCCAAAAGGAGGAGTGTTTGATAATATTACAGCCATCTCACTCATAGGAAATGAGAATCTTTGTGGCGGAATACCTCTACTAAGGCTACCCAAATGCCCAAGTAAGTCGAAGAAACAAGTCAATGTCATAATCCTTGTAATCATTGTGATAGCTGGTGCTCTTACTTGTTTTGCAATGTGCCTAATCATTTTCATGAGGAGAAAACATAAAAAGTTGTCTTCTTCCACACCTTCCCCACAAAATGATCATTTCACGGCTTCTTATAAAGAGCTGCATGATGCAACCAATGGATTTTCTTCATCCAATTTGGTTGGTGTAGGAAGCTTTGGTTCTGTATATAAAGGAACTCTTCAGCACTTTGAAAGTTTTATTGCTGTGAAGGTGCTAAATCTTCAAGCACATGGGGCAACAAAGAGTTTCATCACAGAATGCAAAACTCTTAGTAAGGTCCGACATAGGAATCTATTGAAGATTCTAACTACATGTTCAAGTGTTGATTACAAAGGCAATGATTTTAAGGCCCTTGTATTTGAGTTCATGCCTAATGGGAGCCTGGAGAATTGGTTGTCAGCAAACGAACTTGGTGAAGCTAGAGATTTATATATGAATTTCAGACAGAGATTGAACATAGCTATTGATGTGGCTCATGCTTTGGAGTATCTTCATCATGGTTTTGGAGAAACTATTGTTCATTGTGATATCAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTGGCACATTTAGGAGACTTTGGATTAGCTAGGCTTCTTCATGAAGTTACAAGCTACTCTGGTGAGGGCCAAACTACATCTTTAGCAATTAAGGGAACAATTGGCTATATTCCTCCAGAGTACGGTGAAAGTGACCAAGTTACAACAAAAGGGGATATCTATAGCTATGGGGTACTTATGCTAGAGATGCTCACTGGAAAGAAGCCGACAGATAGCATGTTTCGTGATGATCTAAGTCTACCCAAATTCTGCAAGCTAGCATTACCAGATGGAGTCCTTGAGATTGTGGATTCAAATTTGCTTGTTCTATCTGATAGAGACCGTAGGAAAGTTATGCAGAATTCAAATGTGGAACATCAAATTCAAGAGTCTCTAGCTAGCTTTGGTGGGATTGGAGTGGCATGCTGTGCAGAATTTCCTGGTGAAAGAATGGGTATCAAAGATGCTTTAGTGGAGTTGCTTGCAATTAAGCAAAAGCTATCCACGTTCAACATTGTCATATGA 3042 0.3876 MIPYIIATNFLLCIASQIPFPTEAAATGSETDRLALLALKDKLTNGVSEALPTWNDSVHFCKWQGVTCGSRHIRVSALNLTSQNLGGTIAPALGNLTFLKLLNLSHNRLHGEVPKQIGYLKQLQILHLGDNNLRELPIELANCSKLHQIFFGINNLTGKIPFWFGSMQQLTLLSIHTNEFLGNIPPSLGNLSSLEVLSLTSNNLEGSIPQSLGGLSNLHRLDLGSNNFSGIIPSSLHNLSRMEILNFLFNSLSGTIPLNIDLAFPNLRKFNAGYNRLMGTIPASLSNLSQLQQFAINENAFSGLVPTSLGRLQNLQKFEIAGNNFGGEQGHDLDFLSSFTNCSQLQEIEISYNKFSSVLPNSIGNFSSHLEWLHMGVNRIIGSIPNEIGQLNGLIFLGLQHNLLQGTFPHSIGKLENLGELFLDQNQLSGKLPDVFGNLTKLIQLSLYNNNLEGSIPLSLKHCEGLQILYLFQNNLSGHMPKLTFGHLESLIQLDLYTNSLIGPIPSEIGKMKQLVRLDLSQNNFSGDIPTELGECLQLTELYLYENPLHGSIPSSFSFLKSLIILDLSNNNLSGTIPQELKDFPMLEIVNLSHNHFHGEVPKGGVFDNITAISLIGNENLCGGIPLLRLPKCPSKSKKQVNVIILVIIVIAGALTCFAMCLIIFMRRKHKKLSSSTPSPQNDHFTASYKELHDATNGFSSSNLVGVGSFGSVYKGTLQHFESFIAVKVLNLQAHGATKSFITECKTLSKVRHRNLLKILTTCSSVDYKGNDFKALVFEFMPNGSLENWLSANELGEARDLYMNFRQRLNIAIDVAHALEYLHHGFGETIVHCDIKPSNVLLSDDMVAHLGDFGLARLLHEVTSYSGEGQTTSLAIKGTIGYIPPEYGESDQVTTKGDIYSYGVLMLEMLTGKKPTDSMFRDDLSLPKFCKLALPDGVLEIVDSNLLVLSDRDRRKVMQNSNVEHQIQESLASFGGIGVACCAEFPGERMGIKDALVELLAIKQKLSTFNIVI 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4170g00018 1013 Gene3D Ribonuclease Inhibitor 28 177 IPR032675 -
Pral4170g00018 1013 Gene3D Ribonuclease Inhibitor 178 262 IPR032675 -
Pral4170g00018 1013 SUPERFAMILY L domain-like 368 623 - -
Pral4170g00018 1013 ProSitePatterns Protein kinases ATP-binding region signature. 705 728 IPR017441 GO:0005524
Pral4170g00018 1013 FunFam LRR receptor-like serine/threonine-protein kinase EFR 331 639 - -
Pral4170g00018 1013 SUPERFAMILY L domain-like 29 325 - -
Pral4170g00018 1013 SMART serkin_6 699 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00018 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Pral4170g00018 1013 FunFam LRR receptor-like serine/threonine-protein kinase EFR 669 780 - -
Pral4170g00018 1013 PANTHER OS04G0122200 PROTEIN 230 1005 - -
Pral4170g00018 1013 FunFam Piriformospora indica-insensitive protein 2 138 233 - -
Pral4170g00018 1013 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Pral4170g00018 1013 Gene3D Transferase(Phosphotransferase) domain 1 781 1010 - -
Pral4170g00018 1013 Pfam Protein kinase domain 701 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00018 1013 Gene3D Ribonuclease Inhibitor 331 642 IPR032675 -
Pral4170g00018 1013 SUPERFAMILY Protein kinase-like (PK-like) 680 998 IPR011009 -
Pral4170g00018 1013 SMART LRR_typ_2 560 583 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 191 214 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 415 438 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 288 311 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 439 462 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 512 536 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 96 118 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 584 609 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 215 238 IPR003591 -
Pral4170g00018 1013 SMART LRR_typ_2 120 143 IPR003591 -
Pral4170g00018 1013 Gene3D Phosphorylase Kinase; domain 1 685 780 - -
Pral4170g00018 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 781 1010 - -
Pral4170g00018 1013 ProSiteProfiles Protein kinase domain profile. 699 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4170g00018 1013 FunFam Leucine-rich repeat receptor-like kinase 34 137 - -
Pral4170g00018 1013 Gene3D Ribonuclease Inhibitor 263 330 IPR032675 -
Pral4170g00018 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 234 329 - -
Pral4170g00018 1013 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Pral4170g00018 1013 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4170g00018 Pral-Chr4170 200426 204011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4170g00018 23 1005 Receptor kinase-like Gene Family AT3G47570 42.557 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4170g00018 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4170g00018 - - ahf:112766919 1043.88