Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4167g00003 ATGGCTACTAAATCTGTTGTAGACTTAATAGAGTCGTCCTCCGGGGTTCATTTTTCTGGATTTCATATGGATCCTTTAGAGAAAATAAATGCTGGAACAGAGCCTCCAACAACTTCTGTGGCTGACCACATGTATAATCAACCGTTTGTCATAGGTGTTGCTGGTGGAGCTGCAGCTGGGAAAACTGAAGTTTGTAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAGGAGGAACTCACTAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGCAATTGCTTGAAGTTATGGACAAATTGAAGCATGGACAAGCTGTCGATATTCCAAATTATGACTTCAAGAGTTATAAAAGGGATGCTTTGCCCGCTAGACGGGTAAACCCTTCTGATGTAATCATTTTGGAAGGAATTCTTATTTTCCATGATCCTCGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACAGTTCAGAAGGGTCGGGATATTGGTGCTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCCGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATATCCTAACCTTTATGTTATTCAGTCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTGAAATAAAAACACATGATTTTGTATTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTGGGACATTTACCATTTACAGAAAAACAAGTAATCACTCCGACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCTGTAGTCAGGAGTGGGGAGAGTATGGAGAATGCCTTAAGAGCATGCTGTAAAGGTATCAAGATTGGCAAAATTCTTATTCATAGGGAAGGGGAAGGGGACAACAGTCAGCAGCTGATATATGAAAAATTGCCTAACGATATCTCTGATAGGCACGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTTATAAAAAAGGGTGTTCCAGAGTCCAACATTATATTTCTAAACCTCATATCGGCGCCCAAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAGATTGTGACATCTGAGATCGAGTTGGGCCTGAATAAAGACTTCCGTGTTGTACCGGGTATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAGCAAGTGGTGGTCCCTTCACAGTAG 1443 0.4089 MATKSVVDLIESSSGVHFSGFHMDPLEKINAGTEPPTTSVADHMYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLEVMDKLKHGQAVDIPNYDFKSYKRDALPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSEIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVVRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPKGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVVPSQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4167g00003 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 241 IPR027417 -
Pral4167g00003 480 FunFam Uridine kinase 252 469 - -
Pral4167g00003 480 PRINTS Uridine kinase signature 180 190 - -
Pral4167g00003 480 PRINTS Uridine kinase signature 78 89 - -
Pral4167g00003 480 PRINTS Uridine kinase signature 123 138 - -
Pral4167g00003 480 PRINTS Uridine kinase signature 194 205 - -
Pral4167g00003 480 PRINTS Uridine kinase signature 216 229 - -
Pral4167g00003 480 PRINTS Uridine kinase signature 48 65 - -
Pral4167g00003 480 FunFam Uridine kinase 45 251 - -
Pral4167g00003 480 Gene3D - 252 469 IPR029057 -
Pral4167g00003 480 PANTHER URIDINE KINASE 42 379 - -
Pral4167g00003 480 Gene3D - 45 251 IPR027417 -
Pral4167g00003 480 CDD PRTases_typeI 325 442 IPR000836 -
Pral4167g00003 480 NCBIfam uridine kinase 47 248 IPR000764 -
Pral4167g00003 480 CDD UMPK 61 248 IPR000764 -
Pral4167g00003 480 Pfam Uracil phosphoribosyltransferase 266 469 - -
Pral4167g00003 480 Pfam Phosphoribulokinase / Uridine kinase family 50 236 IPR006083 GO:0005524|GO:0016301
Pral4167g00003 480 SUPERFAMILY PRTase-like 251 470 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4167g00003 Pral-Chr4167 10038 17676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4167g00003 1 472 PRT Gene Family AT4G26510 81.818 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4167g00003 K00876 - gmx:100798205 840.876