Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4164g00040 ATGGGCGATCCAGCGTACAGGGTGGAAACAACCTCACGTCTTGCCCAATGGCGAATCGACAACTTGACTTCCTGCACTTACCGCAAGTCTGATCCTTTCAAGATTGGCATGTGGAACTGGCATTTGGTTCTAGAGAAGAACAGGGGCATGTTTGTTAGGTTATACCCAGAAATGTCCAATCTTTCAAGAGAAAAGCCACCCATTGTATCTCTAATCTTAAGGGTTGTTAATACTTGTGGAGATCGCAAGGCCATGACTCACTCAGAAATAAAAGACAAATTGATCAAGCCCAGTGAAGACTTCGTTTGGGCAATTGAGGCCCCACTGACTGGAAAATTCATTATTGACGTTGAGTTCCTGGATTTGAAGACGGCATCCCCCAAGGATGAACCTTGCTCCATCTGGGATGATCAAATTTTGCAGAAAACCTCCAATGAAACAGCCCTTCAATCCCTTAGTCGAATGCTAGCAGAACACATCCACACGGACATCATGATCAATGCTGCAGATGGAAGCATCCAGGCACATCGCGCTGTTCTTGCTGCTCGATCGCCTGTCTTCAGCAGTATGTTCTCATATAATCTTAAGGAGAAAGAGTTATCTGCTGTAGACATCCCAGACATATCAGTTGAAGCTTGCCAAGCCTTTCTCAATTATCTTTATGGGAGCATCAAGCATGAAGAATTTCTGACAAATCGGCTAGTCCTTCTCTATGCAGCTGATAAGTATGACATATCTGACTTGAAAGAGGCATGCCATAAGAGTCTTCTCAAAGATATTGATTCCAAAAATGTACTTCAGAGACTCCAACATGCTTCTTTATACGGATTGCCGGAATTGAAGATGAGCTGTATGCAATATCTTGTGAAATTTGGTAAATTATATGACATTCGAGATGATTTCAAAGAATTCATGCAATATGCAGACAGGGATCTGATTGCTGAAATCTTCAATGAAATTATCACTACCTGGAAAGGATTCTGA 984 0.4228 MGDPAYRVETTSRLAQWRIDNLTSCTYRKSDPFKIGMWNWHLVLEKNRGMFVRLYPEMSNLSREKPPIVSLILRVVNTCGDRKAMTHSEIKDKLIKPSEDFVWAIEAPLTGKFIIDVEFLDLKTASPKDEPCSIWDDQILQKTSNETALQSLSRMLAEHIHTDIMINAADGSIQAHRAVLAARSPVFSSMFSYNLKEKELSAVDIPDISVEACQAFLNYLYGSIKHEEFLTNRLVLLYAADKYDISDLKEACHKSLLKDIDSKNVLQRLQHASLYGLPELKMSCMQYLVKFGKLYDIRDDFKEFMQYADRDLIAEIFNEIITTWKGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4164g00040 327 Pfam BTB/POZ domain 155 258 IPR000210 GO:0005515
Pral4164g00040 327 SUPERFAMILY POZ domain 146 258 IPR011333 -
Pral4164g00040 327 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Pral4164g00040 327 PANTHER OS08G0495500 PROTEIN-RELATED 5 326 IPR044714 -
Pral4164g00040 327 CDD BTB_POZ_ZBTB_KLHL-like 161 243 - -
Pral4164g00040 327 Gene3D Potassium Channel Kv1.1; Chain A 136 290 IPR011333 -
Pral4164g00040 327 SMART BTB_4 162 260 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4164g00040 Pral-Chr4164 453049 455528 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral4164g00040 BTB 9.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4164g00040 K10523 - qsa:O6P43_013451 501.13