Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4164g00035 ATGTCCCAAGCCCTTAATCTCCCTCTACCCGCCGGCCGGCCACTCCGTTCTTCATCACCCTCCGCCTCATCTTTCAGATTTCTCCGGCGTCTACCTGTGAAGTCCTCAAAGAAGCGCAGAACTTCGATCGGCGCTGTTGCGATGGAGGCCGATCCAGTAGTGATCGATTGTCGGCGGTCAATTAGTCTCTATGAGGTGCTCCGAGTCAACCAGAATGCGTCTCCGACGGAAATCAAGTCGGCATATAGGAGCTTGGCCAAGCTTTACCACCCTGATTCGGCCGTGCGCCAATCGGAATCGGACGGAAGGGACTTCATCGCGATCCACAACGCCTATGAGACGCTGTCCGATCCGTCGGCCAGAGCACTGTATGATCTGTCTTTGAGGGCTGCTCGCCGGAGGAGACGTCCGTATCTATCATCGATGCAAGATCGGTCTTCCGGATTCTACACGACCCGAAGATGGGAGACGGATCAATGCTGGTAG 486 0.5576 MSQALNLPLPAGRPLRSSSPSASSFRFLRRLPVKSSKKRRTSIGAVAMEADPVVIDCRRSISLYEVLRVNQNASPTEIKSAYRSLAKLYHPDSAVRQSESDGRDFIAIHNAYETLSDPSARALYDLSLRAARRRRRPYLSSMQDRSSGFYTTRRWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4164g00035 161 Gene3D DnaJ domain 55 148 IPR036869 -
Pral4164g00035 161 SMART dnaj_3 61 120 IPR001623 -
Pral4164g00035 161 MobiDBLite consensus disorder prediction 1 21 - -
Pral4164g00035 161 PRINTS DnaJ domain signature 64 82 IPR001623 -
Pral4164g00035 161 PRINTS DnaJ domain signature 82 97 IPR001623 -
Pral4164g00035 161 PRINTS DnaJ domain signature 100 120 IPR001623 -
Pral4164g00035 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 3 161 - -
Pral4164g00035 161 SUPERFAMILY Chaperone J-domain 60 132 IPR036869 -
Pral4164g00035 161 CDD DnaJ 64 117 IPR001623 -
Pral4164g00035 161 ProSiteProfiles dnaJ domain profile. 62 128 IPR001623 -
Pral4164g00035 161 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Pral4164g00035 161 Pfam DnaJ domain 63 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4164g00035 Pral-Chr4164 350353 351150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4164g00035 64 125 C2H2 Transcription Factor Family AT1G74250 45.455 9.90e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4164g00035 - - qsa:O6P43_013446 146.747