Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4164g00015 ATGGCGATGTTATTGAGGAAAATGTGGGAATCGGTGTCGAACCGTTCCAGTTCGGGTTCAAATTCCAACTCGCCGGAACGCTTTCGGTGCGTGGATTCCCCTCTGGGTGTGTTCGAGCAAATTCCTTCCGATATATTGATCCAAATCCTGAGGCTTCTGGGTCCCAAAGAAGCTGCTAGGTTGAGTCTTGTGTGCAAAGCATGGAGATCGCTGGCCTCCGATAATCGACTGTGGATTTATTTCCTTCAGACTTGCCAATTGGAGCCATGGGATACCATTTTTTTCGCCGAGACCAATTTGAGGTCCGGTCATCCTCTTCCAACCTTAGTTGGTCAGATGTCTCAGCTATCTTTCAAGCGTATATATGGCTTACGAGAACAAGTTCCTGGTGCTGTTATCATCGATGGTGGTTCTGGCTATTGCAAGTTTGGTTGGAGCAAATATGACAGCCCATCAGGGCGATCAGCTACGTTTTTGGAATTCGGTAACCTTGAGTCTCCAATGTACACTAGACTTAGACATTTTTTTGCAACTATTTATAACAGGATGCAGGTTAAACCAAGTACTCAACCAGTCATTGTTTCTATTCCAATATGCCATTATGATGATACCGAATCTGCCAAAGCATCAAGGCGGCAGCTTAAGGAGGCAATATGTGCCGCCCTCTTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCCACTTTGGCTCTGTATGCTGCAAAACAAACTTCTGGAATAGCTGTTAATGTTGGTTTTCAGGTCACATCTATAGTTCCAATTCTGAATGGTAAAGTCATGCGCAAGGTGGGTGTGGAAGTTGTGGGACTGGGAGCGATCAAACTTACAGGATTCCTTAGGGAGCTGATGCAGCGGAACAACATGAATTTTGAATCTTTGTACACTGTTCGCACACTGAAAGAGGAGCTATGCTATGTTGCTATTGATTATGAAGCTGAACTATTGAAAGATACGCAAGCATCGTTTGAAGCAGCGGGAGAAGGATGGTTTACACTTTCGAAAGAGCGTTTTCAAACAGGAGAGATCTTGTTCCAGCCTCGGCTTGCTGGATTGAAAGTAACAGGCAGCACATGTCAGTGTCTAGTATATATGCAACTTCCTTGA 1131 0.4492 MAMLLRKMWESVSNRSSSGSNSNSPERFRCVDSPLGVFEQIPSDILIQILRLLGPKEAARLSLVCKAWRSLASDNRLWIYFLQTCQLEPWDTIFFAETNLRSGHPLPTLVGQMSQLSFKRIYGLREQVPGAVIIDGGSGYCKFGWSKYDSPSGRSATFLEFGNLESPMYTRLRHFFATIYNRMQVKPSTQPVIVSIPICHYDDTESAKASRRQLKEAICAALFDMNVPAVCAVNQATLALYAAKQTSGIAVNVGFQVTSIVPILNGKVMRKVGVEVVGLGAIKLTGFLRELMQRNNMNFESLYTVRTLKEELCYVAIDYEAELLKDTQASFEAAGEGWFTLSKERFQTGEILFQPRLAGLKVTGSTCQCLVYMQLP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4164g00015 376 SMART actin_3 129 375 IPR004000 -
Pral4164g00015 376 SUPERFAMILY F-box domain 34 93 IPR036047 GO:0005515
Pral4164g00015 376 SUPERFAMILY Actin-like ATPase domain 246 364 IPR043129 -
Pral4164g00015 376 ProSiteProfiles F-box domain profile. 35 81 IPR001810 GO:0005515
Pral4164g00015 376 Gene3D - 248 361 - -
Pral4164g00015 376 SUPERFAMILY Actin-like ATPase domain 130 251 IPR043129 -
Pral4164g00015 376 Pfam Actin 178 360 IPR004000 -
Pral4164g00015 376 CDD F-box_AtARP8-like 38 81 - -
Pral4164g00015 376 CDD NBD_sugar-kinase_HSP70_actin 132 276 - -
Pral4164g00015 376 Pfam F-box-like 39 78 IPR001810 GO:0005515
Pral4164g00015 376 Gene3D Actin; Chain A, domain 4 281 359 - -
Pral4164g00015 376 Gene3D - 33 104 - -
Pral4164g00015 376 PANTHER ACTIN 173 361 IPR004000 -
Pral4164g00015 376 SMART fbox_2 41 81 IPR001810 GO:0005515
Pral4164g00015 376 Gene3D - 126 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4164g00015 Pral-Chr4164 112153 117671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4164g00015 178 364 Cytoskeleton Gene Families AT3G12110 31.122 2.72e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4164g00015 K16616 - qsa:O6P43_013433 579.711