Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4164g00010 ATGTTTCTTTCAAAGGGTTGGAAGCATGAAGTTGTTCTCAGCTTGTGGTTTTGCTGCCTTTTGCTACTGGTTGCTGCCCAGGATCCAATCACTCATCCCATTGAATTTGACGCATTGAAAACCATCAAGGAAAGTTTGGTTGATCCTAATGGGAATCTGAGCAACTGGGATCGTGGAGATCCATGTAGATCTAACTGGACAGGGGTTGTATGCTATAATACAACATTAGATGATGGCTTTCTCCACGTTCAAGAATTGCAATTACTGAATATGAATCTTTCTGGATTTTTGGCACCAGATATTGGCCGCCTGTCTTCTCTGAAAATATTGAGCTTTATGTGGAACGACATAAGGGGGACTATCCCAAAGGAAATTGGCAATATCCAGACGTTGGATCTATTGCTCTTGAATGGTAACCAATTAACAGGTCTTCTGCCGGAAGAGCTTGGTTATTTTCCAAAATTGAGAAGATTTCAAATTGATGAAAACCAAATATCAGGACCTCTACCTGCCTCATTTGCAAACCTGAATGGGACAAAGCATTTTCACATGAACAACAATTCAATTAGTGGACAAATCCCACCAGAGCTCGCCCGCTTGCCAAATCTTATTCATCTTCTTCTTGACAACAACAACCTATCTGGATCTCTTCCTCCTGAGCTCTCCAATATGCCCAATATACTTGTAATTCAACTCGATAACAATAATTTCAGTGGAAACACCATTCCAGAGTCTTACGCCAACATGTCCAAATTGTTGAAATTGAGCCTTAGGAATTGCAGCTTGCAAGGACCAGTTCCTGACTTTAGTCGGGCACCGAACATTAGTTATCTTGACCTCAGTTCCAATCAATTGAATGGATCGATTCCTGCCAATAAGCTTTCTGACAATGTCACAACAATTGATTTATCAAACAATAAGCTTACTGGAGCTATTCCATCTTATTTTTCTCGTCTCCCTCTTCTTCAGAGATTGTCCATTGGAAACAATTCTTTGAATGGCAGTATTCCTGCTGCCATCTGGCAGGACAAGACTTTAAATGCAACGGACACTTTAATCATGGAATTTCCATATAATAATTTTACAAGCATATCGGGCAGTATTAACCTCCCTCCAAATGTCTCACTCTGGCTTGAGGGAAATCCTCTATGTTCAAATGCTAGCCTAGCTGAGTTCTGTGGACTAAAAGCCAATGATACAGATACGAAGGTTTCGACATACTTCAATGGTAGCTGTAGTAATAGGGCATGCCCCCCACCTTATGAACCTTCTCCATCATCTCCAGAAGAGTGTTATTGTGCAGCCCCTTTGATTGTTGATTATCGGCTGAAAAGTCCGGGAATTTCAGCTTTTCCTTCTTATGTAGATTTATTTGAGAACTATATGGCAACTGAACTCGAGTTATTCATGAATCAACTATACATCGATGCATATTTTTGGGAAAATAGGAGACGACTGAGAATGTTCTTGAAGCTTTATCCTGTATATGATGTTCAGAACCAAAGCTCACATGTTTTCAATAGAAGTGAGGTTCTAAGGCTAAGAAGCATGTTCACAGGATGGGGAATTCCTAACCACGATGTATTCGGCCCGTATGAACTACTTGGCTTCCATCTCTGGATCCTTACAGGGATTGTAAAAACCTCTGAAGGAAGTTCAGGGATAAGCAGGGGTGCACTGGTTGGCATAATATTAGGGGCAATTGCCTTTGCCCTTACATTATCGGCAATTGTCAGTCTTTTTATATCCAGAATGGTCATGAGAGGCCGGCGTACAACATCAAGACGACATCAGACTTCAAAGGCTTCCATAAAGATTGATGGTGTGAGGGCCTTTACATATGGAGAAATGGCACAGGCCACAGACAATTTTAGTAACACAGCAAAAATTGGCCAAGGGGGTTATGGGAAGGTTTACAATGGTATTCTTGTTGATGGCACTGTGGTTGCCATAAAGCGGGCACAGGAGGGATCCCTGCAAGGTGAGAGGGAGTTCCTAACAGAAATACAATTACTATCCCGGTTACACCATCGTAACCTTGTGTCCTTGATTGGATACTGTGATGAAGAAGGCGAACAGATGCTGGTTTATGAATTTATGTCAAATGGGACACTTAGGGATCACCTTTCTGCTCGTTCACAAGAACCTCTGAGTTTTGCTATGAGAATGAGGATTGCACTAGGGTCAGCTAAAGGCATTCTGTACCTACATGCGGAAGCTGACCCGCCTATATTCCACCGAGATGTCAAAGCTAGCAACATATTATTAGATTCAAAGTTCACAGCAAAAGTTGCTGATTTTGGACTATCAAAGCTGGCCCCTGTTCCAGACATTGAAGGAGCTGTGCCAGCTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCATAAACTGACTGACAAGAGTGATGTTTACAGTCTTGGTGTTGTATTTCTGGAGCTGCTGACAGGGATGCAACCAATCTCGCATGGCAAAAATATTGTTAGAGAGGTTAATGTTGCATACCAATCTGGTATGACATTCTCTGTCGTTGATGGACGCATGGGATCTTGTTCTCCAGAGTGCATTGAGAAATTTTTGGATCTGTCCTTACTGTGTTGCCAAGATGAACCAGATGCACGGCCTAAAATGTCAGAAGTGGTCCGAGAGCTCGAAAACATATGGTCTATGATGCCTGAGGCTGATACTAGGAGAGCTGAGCTTGATACTAGGAGAGCTGAATCTGTAACCCCTGGTAATGATTCTGGAACAATGTTCAGTTCATCTTCATCTTCTGCTATAAGGGCTTCCTATGTATCATCAGACATGTCAGGTAGTGACCTTATCAGCGGGGTGGTACCGACCATCCCGCCGAGATAG 2886 0.4252 MFLSKGWKHEVVLSLWFCCLLLLVAAQDPITHPIEFDALKTIKESLVDPNGNLSNWDRGDPCRSNWTGVVCYNTTLDDGFLHVQELQLLNMNLSGFLAPDIGRLSSLKILSFMWNDIRGTIPKEIGNIQTLDLLLLNGNQLTGLLPEELGYFPKLRRFQIDENQISGPLPASFANLNGTKHFHMNNNSISGQIPPELARLPNLIHLLLDNNNLSGSLPPELSNMPNILVIQLDNNNFSGNTIPESYANMSKLLKLSLRNCSLQGPVPDFSRAPNISYLDLSSNQLNGSIPANKLSDNVTTIDLSNNKLTGAIPSYFSRLPLLQRLSIGNNSLNGSIPAAIWQDKTLNATDTLIMEFPYNNFTSISGSINLPPNVSLWLEGNPLCSNASLAEFCGLKANDTDTKVSTYFNGSCSNRACPPPYEPSPSSPEECYCAAPLIVDYRLKSPGISAFPSYVDLFENYMATELELFMNQLYIDAYFWENRRRLRMFLKLYPVYDVQNQSSHVFNRSEVLRLRSMFTGWGIPNHDVFGPYELLGFHLWILTGIVKTSEGSSGISRGALVGIILGAIAFALTLSAIVSLFISRMVMRGRRTTSRRHQTSKASIKIDGVRAFTYGEMAQATDNFSNTAKIGQGGYGKVYNGILVDGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSARSQEPLSFAMRMRIALGSAKGILYLHAEADPPIFHRDVKASNILLDSKFTAKVADFGLSKLAPVPDIEGAVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNVAYQSGMTFSVVDGRMGSCSPECIEKFLDLSLLCCQDEPDARPKMSEVVRELENIWSMMPEADTRRAELDTRRAESVTPGNDSGTMFSSSSSSAIRASYVSSDMSGSDLISGVVPTIPPR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4164g00010 961 PANTHER RECEPTOR-LIKE PROTEIN 55 42 897 - -
Pral4164g00010 961 Gene3D Ribonuclease Inhibitor 34 294 IPR032675 -
Pral4164g00010 961 Gene3D Ribonuclease Inhibitor 295 382 IPR032675 -
Pral4164g00010 961 MobiDBLite consensus disorder prediction 905 933 - -
Pral4164g00010 961 Pfam Leucine rich repeat 297 341 IPR001611 GO:0005515
Pral4164g00010 961 Gene3D Transferase(Phosphotransferase) domain 1 700 916 - -
Pral4164g00010 961 MobiDBLite consensus disorder prediction 917 933 - -
Pral4164g00010 961 FunFam Leucine-rich repeat protein kinase family protein 588 699 - -
Pral4164g00010 961 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
Pral4164g00010 961 SUPERFAMILY Protein kinase-like (PK-like) 609 907 IPR011009 -
Pral4164g00010 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Pral4164g00010 961 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4164g00010 961 SMART serkin_6 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4164g00010 961 Gene3D Phosphorylase Kinase; domain 1 594 699 - -
Pral4164g00010 961 SUPERFAMILY L domain-like 45 397 - -
Pral4164g00010 961 Pfam Protein tyrosine and serine/threonine kinase 627 893 IPR001245 GO:0004672|GO:0006468
Pral4164g00010 961 CDD STKc_IRAK 630 896 - -
Pral4164g00010 961 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 909 - -
Pral4164g00010 961 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
Pral4164g00010 961 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4164g00010 Pral-Chr4164 35878 48764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4164g00010 18 906 Receptor kinase-like Gene Family AT5G01950 57.254 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4164g00010 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4164g00010 - - tcc:18591108 1297.34