Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4164g00009 ATGCCTCTTCCAAAGAGTTGGAAGTATGAAGTTGTTTTCAGCCTGTGGTTCTTCTGCTTTTTGCTACTGGTTGCTGCGCAGGATTTTATCACTGACCCCATTGAAGTTGACGCATTGAAAAGTATCAAGCAAAGTTTGGTTGATCGTAATGGAAATCTGGGAAACTGGAATCGTGGAGATCCATGTAGATCTAACTGGAGAGGGGTTGTCTGCTATAATAAGACAGCTAATGGTTATCTCCACGTTAGAGAATTGCAACTACTGAATATGAATTTAACTGGAACTTTGGCACCAGAGACTGGCCAATTGGCTTATCTGAAAATATTGAGCTTTATGTGGAACAACATAAGTGGGAGCATCCCGAAGGAAATTGGCAATATCAAGACTTTGAGGCTCTTACTCTTGAATGGAAACCAAATAACAGGTCCTCTGCCCGAAGAGCTTGGTTATTTTCCAGACTTAGACAGAATACAAATTGATCAGAACAAAATATCAGGACCTTTACCTGCATCATTTGCAAACCTGAACAAGACGAAGCACTTTCATATGAACAACAATTCAATCAGTGGACAAATCCCACCAGAGCTCTCCCGCTTGCCATATCTTGTTCACCTTCTTCTTGACAATAACAATTTATCAGGATATCTTCCTCCTGAGCTCTCCAAGTTGCCCAACATAACTATAATGTATGGATTCTTCTTCTTTATGGAATGTGTGGGTAGTAGATACACAGCTTCTGATGCAGCAATCTATCAACTTGATAACAATAACTTCAGTGGGAAAACCATTCCAGAGTCTTATGCCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAATTGCAGCTTGCAAGGATCCGTTCCTGATTTAAGTAGTATACCGCAACTTGGTTATCTTGACCTAAGTTCCAATGAGTTGACTGGATCGATTCCTCCCAATAAGCTTTCTGACAATATTACAACAATCGATTTATCAAACAACAAGCTTGCTGGAGCCATTCCACCCTATTTTTCTCGTCTTCCTCTTCTTCAGAGATTGTCAATTGCAAACAATTCTTTGAATGGAAGTATTCCTTCTTCCATTTGGCAGAGCAAGACTTTAAATGCAACGGAGAGTTTTGTCATGGAATTTCAACATAATAGTTTTACAAGCATATCAGGCAGTACTAGCCTTCCTCGAAACGTCTCACTCTGGCTTGAGGGAAATCCTCTATGTTCAAATGAGAGCCTAGCTCAGTTCTGTGGGTTAGAAGCCAATAACACTGATACCATGGTTTCACCATACTTCAATGGTAGCTGTTTTAGTCAAGCATGTCCCCCTCCTTTTGAATATTCTCCATCATCTCCAGTGAAGTGTTTCTGTGCAGCCCCTTTGATTGTTGATTATCGGCTGAAAAGTCCGGGAATTTCGGCTTTTCCTTCTTATATAGATCTATTTGAGAACTATCTGACAAATGGACTTAACTTGTTCATCTATCAACTATACATTGATACGTATTTTTGGGAAGAAGGGCCACGACTGAGAATGCTCTTGAAGCTCTATCCTGTCTATGATGCTCAGAACCAAAGCTCACATATTTTCAACAGAAGCGAGGTTCTAAGGCTAAGAGGCATGTTCACAGCATGGTCAGTTCCTGACAACGATATATTTGGGCCTTATGAACTACTCGGCTTCCATCTCCTGGATCCTTATAAGGATTTGATAGAGACCTCCAAAAAAAGTTCAGGGATAAGCAAGGGTGCACTGGTTGGCATTATAATAGGGACAGTTGCCTGTGCTGTTATATTATCTGGAATTGTCAGTCTTGTTATATTCGGAGTGCTCACGAGACGCCAGCATTCAATATCAAAACGACATCAAACTTCAAAGATTTCCATAAAAATCGATGGTGTGAGGGCCTTTACATACGAAGAAATGGCACAGGCTACAGAAAATTTTAGCGACACAGCACAAGTTGGCCAAGGGGGTTATGGGAAGGTTTATAAAGGGATTCTTGTTGATGGCACTGTGGTTGCCATAAAGCGGGCACAGGAAGGATCCCTGCAAGGTGAGAGGGAGTTCCTGACAGAAATACAATTATTATCCAGGTTACATCATCGTAACCTTGTGTCCTTGGTTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAGTTTATGTCAAATGGCACACTTAGAGATCACCTTTCTGCTCATTCAAAAGAAGCTCTGAGTTTTGCTATGAGAATGAGGATTGCACTAGGGTCAGCTAAAGGTATTCTGTATCTACATACAGAAGCGGACCCACCAATATTCCACCGTGATGTCAAGGCTAGCAACATATTATTGGATTCAAGGTTCACAGCAAAAGTTGCTGACTTTGGACTATCACGGCTTGCCCCTGTTCCAGACATTGAAGGAGTTGTGCCAGCTCATGTATCCACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCGTAAGTTGACTGACAAGAGTGATGTTTACAGCCTTGGTGTTGTATTTCTAGAAATACTGACTGGGATGCAACCAATATCGCATGGCAAAAATATTGTTAGAGAGGTTAATATGGCATACCAATCTGGCGCGGTATTCTCTGTTATTGATGGACGCATGGGGTCTTACTCTTCAGAGTGCATTGAGAAATTCTTGGCTCTATCCTTAAAGTGTTGCCAAGATGAGCCAGATGCACGGCCTAGAATGGCAGAAGTGGTTCGAGAACTCGAAAACATATGGTCTATGATGCCTGAGTCTGATACCAAAAGAGCTGAATCTGTAACACCGAGTAGTGATTCTGGAAAATTGGTCAGTTCATCTTCATCTTCTGCTATAAAGACTCCCTATGTATCTGGAGATGTCTCAGGTAGTGACCTTATCAGTGGGGTGGTACCTACCATAGCGCCAAGATAG 2931 0.4173 MPLPKSWKYEVVFSLWFFCFLLLVAAQDFITDPIEVDALKSIKQSLVDRNGNLGNWNRGDPCRSNWRGVVCYNKTANGYLHVRELQLLNMNLTGTLAPETGQLAYLKILSFMWNNISGSIPKEIGNIKTLRLLLLNGNQITGPLPEELGYFPDLDRIQIDQNKISGPLPASFANLNKTKHFHMNNNSISGQIPPELSRLPYLVHLLLDNNNLSGYLPPELSKLPNITIMYGFFFFMECVGSRYTASDAAIYQLDNNNFSGKTIPESYANMSKLLKLSLRNCSLQGSVPDLSSIPQLGYLDLSSNELTGSIPPNKLSDNITTIDLSNNKLAGAIPPYFSRLPLLQRLSIANNSLNGSIPSSIWQSKTLNATESFVMEFQHNSFTSISGSTSLPRNVSLWLEGNPLCSNESLAQFCGLEANNTDTMVSPYFNGSCFSQACPPPFEYSPSSPVKCFCAAPLIVDYRLKSPGISAFPSYIDLFENYLTNGLNLFIYQLYIDTYFWEEGPRLRMLLKLYPVYDAQNQSSHIFNRSEVLRLRGMFTAWSVPDNDIFGPYELLGFHLLDPYKDLIETSKKSSGISKGALVGIIIGTVACAVILSGIVSLVIFGVLTRRQHSISKRHQTSKISIKIDGVRAFTYEEMAQATENFSDTAQVGQGGYGKVYKGILVDGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDHLSAHSKEALSFAMRMRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRFTAKVADFGLSRLAPVPDIEGVVPAHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEILTGMQPISHGKNIVREVNMAYQSGAVFSVIDGRMGSYSSECIEKFLALSLKCCQDEPDARPRMAEVVRELENIWSMMPESDTKRAESVTPSSDSGKLVSSSSSSAIKTPYVSGDVSGSDLISGVVPTIAPR 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4164g00009 976 CDD STKc_IRAK 652 918 - -
Pral4164g00009 976 MobiDBLite consensus disorder prediction 927 956 - -
Pral4164g00009 976 SUPERFAMILY Protein kinase-like (PK-like) 631 937 IPR011009 -
Pral4164g00009 976 Gene3D Transferase(Phosphotransferase) domain 1 722 939 - -
Pral4164g00009 976 SMART serkin_6 646 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4164g00009 976 SUPERFAMILY L domain-like 47 420 - -
Pral4164g00009 976 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Pral4164g00009 976 Gene3D Ribonuclease Inhibitor 34 149 IPR032675 -
Pral4164g00009 976 ProSiteProfiles Protein kinase domain profile. 646 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4164g00009 976 Gene3D Ribonuclease Inhibitor 150 232 IPR032675 -
Pral4164g00009 976 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 722 932 - -
Pral4164g00009 976 PANTHER RECEPTOR-LIKE PROTEIN 55 42 919 - -
Pral4164g00009 976 Pfam Protein tyrosine and serine/threonine kinase 650 915 IPR001245 GO:0004672|GO:0006468
Pral4164g00009 976 Gene3D Phosphorylase Kinase; domain 1 607 721 - -
Pral4164g00009 976 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 193 - -
Pral4164g00009 976 FunFam Leucine-rich repeat protein kinase family protein 610 721 - -
Pral4164g00009 976 Gene3D Ribonuclease Inhibitor 245 442 IPR032675 -
Pral4164g00009 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Pral4164g00009 976 ProSitePatterns Protein kinases ATP-binding region signature. 652 674 IPR017441 GO:0005524
Pral4164g00009 976 MobiDBLite consensus disorder prediction 923 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4164g00009 Pral-Chr4164 18491 28371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4164g00009 19 928 Receptor kinase-like Gene Family AT5G01950 57.190 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4164g00009 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4164g00009 - - qsa:O6P43_014171 1376.3