Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4164g00007 ATGCCTCTTCCAAAGAGTTGGAAGTATGAAGTTGTTTTCAGCCTGTGGTTCTTCTGCTTTTTGCTACTGGTTGCTGCGCAGGATTTTATCACTGACCCCATTGAAGTTGACGCATTGAAAAGTATCAAGCAAAGTTTGGTTGATCGTAATGGAAATCTGGGAAACTGGAATCGTGGAGATCCATGTAGATCTAACTGGAGAGGGGTTGTCTGCTATAATAAGACAGCTAATGGTTATCTCCACGTTAGAGAATTGCAACTACTGAATATGAATTTAACTGGAACTTTGGCACCAGAGACTGGCCAATTGGCTTATCTGAAAATATTGAGCTTTATGTGGAACAACATAAGTGGGAGCATCCCGAAGGAAATTGGCAATATCAAGACTTTGAGGCTCTTACTCTTGAATGGAAACCAAATAACAGGTCCTCTGCCCGAAGAGCTTGGTTATTTTCCAGACTTAGACAGAATACAAATTGATCAGAACAAAATATCAGGACCTTTACCTGCATCATTTGCAAACCTGAACAAGACGAAGCACTTTCATATGAACAACAATTCAATCAGTGGACAAATCCCACCAGAGCTCTCCCGCTTGCCATATCTTGTTCACCTTCTTCTTGACAATAACAATTTATCAGGATATCTTCCTCCTGAGCTCTCCAAGTTGCCCAACATAACTATAATTCAACTTGATAACAATAACTTCAGTGGGAAAACCATTCCAGAGTCTTATGCCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAATTGCAGCTTGCAAGGATCCGTTCCTGATTTAAGTAGTATACCGCAACTTGGTTATCTTGACCTAAGTTCCAATGAGTTGACTGGATCGATTCCTCCCAATAAGCTTTCTGACAATATTACAACAATCGATTTATCAAACAACAAGCTTGCTGGAGCCATTCCACCCTATTTTTCTCGTCTTCCTCTTCTTCAGAGATTGTCAATTGCAAACAATTCTTTGAATGGAAGTATTCCTTCTTCCATTTGGCAGAGCAAGACTTTAAATGCAACGGAGAGTTTTGTCATGGAATTTCAACATAATAGTTTTACAAGCATATCAGGCAGTACTAGCCTTCCTCGAAACGTCTCACTCTGGCTTGAGGGAAATCCTCTATGTTCAAATGAGAGCCTAGCTCAGTTCTGTGGGTTAGAAGCCAATAACACTGATACCATGGTTTCACCATACTTCAATGGTAGCTGTTTTAGTCAAGCATGTCCCCCTCCTTTTGAATATTCTCCATCATCTCCAGTGAAGTGTTTCTGTGCAGCCCCTTTGATTGTTGATTATCGGCTGAAAAGTCCGGGAATTTCGGCTTTTCCTTCTTATATAGATCTATTTGAGAACTATCTGACAAATGGACTTAACTTGTTCATCTATCAACTATACATTGATACGTATTTTTGGGAAGAAGGGCCACGACTGAGAATGCTCTTGAAGCTCTATCCTGTCTATGATGCTCAGAACCAAAGCTCACATATTTTCAACAGAAGCGAGGTTCTAAGGCTAAGAGGCATGTTCACAGCATGGTCAGTTCCTGACAACGATATATTTGGGCCTTATGAACTACTCGGCTTCCATCTCCTGGATCCTTATAAGGATTTGATAGAGACCTCCAAAAAAAGTTCAGGGATAAGCAAGGGTGCACTGGTTGGCATTATAATAGGGACAGTTGCCTGTGCTGTTATATTATCTGGAATTGTCAGTCTTGTTATATTCGGAGTGCTCACGAGACGCCAGCATTCAATATCAAAACGACATCAAACTTCAAAGATTTCCATAAAAATCGATGGTGTGAGGGCCTTTACATACGAAGAAATGGCACAGGCTACAGAAAATTTTAGCGACACAGCACAAGTTGGCCAAGGGGGTTATGGGAAGGTTTATAAAGGGATTCTTGTTGATGGCACTGTGGTTGCCATAAAGCGGGCACAGGAAGGATCCCTGCAAGGTGAGAGGGAGTTCCTGACAGAAATACAATTATTATCCAGGTTACATCATCGTAACCTTGTGTCCTTGGTTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAGTTTATGTCAAATGGCACACTTAGAGATCACCTTTCTGCTCATTCAAAAGAAGCTCTGAGTTTTGCTATGAGAATGAGGATTGCACTAGGGTCAGCTAAAGGTATTCTGTATCTACATACAGAAGCGGACCCACCAATATTCCACCGTGATGTCAAGGCTAGCAACATATTATTGGATTCAAGGTTCACAGCAAAAGTTGCTGACTTTGGACTATCACGGCTTGCCCCTGTTCCAGACATTGAAGGAGTTGTGCCAGCTCATGTATCCACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCGTAAGTTGACTGACAAGAGTGATGTTTACAGCCTTGGTGTTGTATTTCTAGAAATACTGACTGGGATGCAACCAATATCGCATGGCAAAAATATTGTTAGAGAGGTTAATATGGCATACCAATCTGGCGCGGTATTCTCTGTTATTGATGGACGCATGGGGTCTTACTCTTCAGAGTGCATTGAGAAATTCTTGGCTCTATCCTTAAAGTGTTGCCAAGATGAGCCAGATGCACGGCCTAGAATGGCAGAAGTGGTTCGAGAACTCGAAAACATATGGTCTATGATGCCTGAGTCTGATACCAAAAGAGCTGAATCTGTAACACCGAGTAGTGATTCTGGAAAATTGGTCAGTTCATCTTCATCTTCTGCTATAAAGACTCCCTATGTATCTGGAGATGTCTCAGGTAGTGACCTTATCAGTGGGGTGGTACCTACCATAGCGCCAAGATAG 2865 0.4178 MPLPKSWKYEVVFSLWFFCFLLLVAAQDFITDPIEVDALKSIKQSLVDRNGNLGNWNRGDPCRSNWRGVVCYNKTANGYLHVRELQLLNMNLTGTLAPETGQLAYLKILSFMWNNISGSIPKEIGNIKTLRLLLLNGNQITGPLPEELGYFPDLDRIQIDQNKISGPLPASFANLNKTKHFHMNNNSISGQIPPELSRLPYLVHLLLDNNNLSGYLPPELSKLPNITIIQLDNNNFSGKTIPESYANMSKLLKLSLRNCSLQGSVPDLSSIPQLGYLDLSSNELTGSIPPNKLSDNITTIDLSNNKLAGAIPPYFSRLPLLQRLSIANNSLNGSIPSSIWQSKTLNATESFVMEFQHNSFTSISGSTSLPRNVSLWLEGNPLCSNESLAQFCGLEANNTDTMVSPYFNGSCFSQACPPPFEYSPSSPVKCFCAAPLIVDYRLKSPGISAFPSYIDLFENYLTNGLNLFIYQLYIDTYFWEEGPRLRMLLKLYPVYDAQNQSSHIFNRSEVLRLRGMFTAWSVPDNDIFGPYELLGFHLLDPYKDLIETSKKSSGISKGALVGIIIGTVACAVILSGIVSLVIFGVLTRRQHSISKRHQTSKISIKIDGVRAFTYEEMAQATENFSDTAQVGQGGYGKVYKGILVDGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDHLSAHSKEALSFAMRMRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRFTAKVADFGLSRLAPVPDIEGVVPAHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEILTGMQPISHGKNIVREVNMAYQSGAVFSVIDGRMGSYSSECIEKFLALSLKCCQDEPDARPRMAEVVRELENIWSMMPESDTKRAESVTPSSDSGKLVSSSSSSAIKTPYVSGDVSGSDLISGVVPTIAPR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4164g00007 954 Pfam Protein tyrosine and serine/threonine kinase 628 893 IPR001245 GO:0004672|GO:0006468
Pral4164g00007 954 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 190 - -
Pral4164g00007 954 SUPERFAMILY L domain-like 47 396 - -
Pral4164g00007 954 MobiDBLite consensus disorder prediction 905 934 - -
Pral4164g00007 954 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 191 293 - -
Pral4164g00007 954 Gene3D Ribonuclease Inhibitor 187 293 IPR032675 -
Pral4164g00007 954 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Pral4164g00007 954 Gene3D Phosphorylase Kinase; domain 1 585 699 - -
Pral4164g00007 954 SUPERFAMILY Protein kinase-like (PK-like) 609 915 IPR011009 -
Pral4164g00007 954 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 910 - -
Pral4164g00007 954 Gene3D Ribonuclease Inhibitor 294 383 IPR032675 -
Pral4164g00007 954 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4164g00007 954 Gene3D Transferase(Phosphotransferase) domain 1 700 917 - -
Pral4164g00007 954 MobiDBLite consensus disorder prediction 901 954 - -
Pral4164g00007 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Pral4164g00007 954 Gene3D Ribonuclease Inhibitor 34 186 IPR032675 -
Pral4164g00007 954 PANTHER RECEPTOR-LIKE PROTEIN 55 42 897 - -
Pral4164g00007 954 SMART serkin_6 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4164g00007 954 FunFam Leucine-rich repeat protein kinase family protein 588 699 - -
Pral4164g00007 954 CDD STKc_IRAK 630 896 - -
Pral4164g00007 954 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4164g00007 Pral-Chr4164 18491 28496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4164g00007 19 906 Receptor kinase-like Gene Family AT5G01950 58.594 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4164g00007 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4164g00007 - - qsa:O6P43_014171 1389.02