Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4160g00001 ATGTTATTCTTTTTCCTCAACCCTTTAATAGACGTAAAGACTAACAACATTCTCTTAGATGATGATCTCCAACCAAAAATTGCTGATTTTGGCTTAGCAAGGCTTTTACCAGAAGAAAAATCTCATCTTAGCACAAAATTTGCTGGAACATTAGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAAAAGGCTGATATTTATAGCTACGGTGTCGTAGTTCTAGAAATTATCAGTGGTGAACGAAGCAATGAATTGAAGGTACAAGGCGAATTTGAAGGCGAATTCCTCCTTCGAAAAGCTTGGAAACTATATGAGAGAGACACACACATCGAGTTGGTGGATGATACCTTGAACCCTAATGATTATAATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTCTGCTATGCACCCAAGCATCTGCAGAATTAAGGCCATCAATGTCTGAAGTCATTGTTCTGCTTCAAGGCAAGGGCTTATTAGAGAATATGAGACCCACCATGCCAATCTTGATTGAAACTTAA 537 0.3799 MLFFFLNPLIDVKTNNILLDDDLQPKIADFGLARLLPEEKSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGERSNELKVQGEFEGEFLLRKAWKLYERDTHIELVDDTLNPNDYNAEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGKGLLENMRPTMPILIET 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4160g00001 178 SUPERFAMILY Protein kinase-like (PK-like) 11 159 IPR011009 -
Pral4160g00001 178 Pfam Protein kinase domain 11 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4160g00001 178 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4160g00001 178 Gene3D Transferase(Phosphotransferase) domain 1 10 168 - -
Pral4160g00001 178 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4160g00001 Pral-Chr4160 5733 6834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4160g00001 11 161 Receptor kinase-like Gene Family AT1G56120 51.974 1.86e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4160g00001 Pkinase 9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4160g00001 - - pcin:129300003 271.166