Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral415g00007 | ATGCCAGACTTCACAGACTTACAAACTCAAAGTGACTCTTACGAGGTGCCCGTGTCCTACCAAGATTTTTCAAGACCTGCCACTTATGTTCAGACGACTCCAAGTCCACAGAATCCTCCGTGGTACCCAGCTGATAGAAGGCATGCAGGACACTACAGCATACCTGACGACTCTTATGAGGTGCCAGTGTTCTACCGATCTTCTTCAAGACAAGCCAGTCCTTATTTTCAGGACGAGAGAACATCAAATGTAGTCAATTATCCACGATTTCTGGAAGACAGTTTTCCAGCACAACCGCGCATTCGAGGTACAGGAATGGGATTTAACCCCAGGCTCAGAGAAACTCGCCAGCCATCAGTTCCACCTCGAAGATACGCACGCCAATCAGACACACAAGCTCCAACTTCGCTAGAAAATCCCAGATCTAGAGCATTGAGCAAGCTGAAGAAAGAAATCTACCAACCCACTATTTCAACTTCAAAAACTCTAGCGAAGAAATTGAGCTTCTATTACAGAGACCCTAAAGGTGTGAATGCGTTAAAGGAGATCGAGAACACGGAAAAGAACGAGAAGGGAAAGAGTTGTGCGGTGTGCTTAGAGGATTTCGTGCCGAAACAGGAGGTAATGGTGACGCCTTGCAAGCACATGTTTCATGAGGATTGTATAATGCCATGGCTGAGAAGCCAAGGTCAGTGTCCAATCTGTAGATTTGTGATCTGCGAAAAAGAGAGGGAGAATCCATTGCCGCTGAACGACGACGATGTTGGCACCAATTACCTAATAGCAGGGGAGCTTCTGTCTATTGCGAGGGCCATGGAAGAAGCCTTCCTATTGCGTCCGGAACCTCACTGA | 852 | 0.4707 | MPDFTDLQTQSDSYEVPVSYQDFSRPATYVQTTPSPQNPPWYPADRRHAGHYSIPDDSYEVPVFYRSSSRQASPYFQDERTSNVVNYPRFLEDSFPAQPRIRGTGMGFNPRLRETRQPSVPPRRYARQSDTQAPTSLENPRSRALSKLKKEIYQPTISTSKTLAKKLSFYYRDPKGVNALKEIENTEKNEKGKSCAVCLEDFVPKQEVMVTPCKHMFHEDCIMPWLRSQGQCPICRFVICEKERENPLPLNDDDVGTNYLIAGELLSIARAMEEAFLLRPEPH | 283 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral415g00007 | 283 | MobiDBLite | consensus disorder prediction | 122 | 141 | - | - | |
Pral415g00007 | 283 | MobiDBLite | consensus disorder prediction | 96 | 141 | - | - | |
Pral415g00007 | 283 | Pfam | Ring finger domain | 194 | 236 | IPR001841 | - | |
Pral415g00007 | 283 | FunFam | RING/U-box superfamily protein | 179 | 253 | - | - | |
Pral415g00007 | 283 | ProSiteProfiles | Zinc finger RING-type profile. | 195 | 236 | IPR001841 | - | |
Pral415g00007 | 283 | SMART | ring_2 | 195 | 235 | IPR001841 | - | |
Pral415g00007 | 283 | SUPERFAMILY | RING/U-box | 187 | 243 | - | - | |
Pral415g00007 | 283 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 87 | 237 | - | - | |
Pral415g00007 | 283 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 180 | 251 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral415g00007 | Pral-Chr415 | 31058 | 33461 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral415g00007 | 139 | 278 | C3H Transcription Factor Family | AT3G58720 | 46.575 | 8.95e-39 | 135 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral415g00007 | - | - | pcin:129314308 | 395.586 |