Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral415g00007 ATGCCAGACTTCACAGACTTACAAACTCAAAGTGACTCTTACGAGGTGCCCGTGTCCTACCAAGATTTTTCAAGACCTGCCACTTATGTTCAGACGACTCCAAGTCCACAGAATCCTCCGTGGTACCCAGCTGATAGAAGGCATGCAGGACACTACAGCATACCTGACGACTCTTATGAGGTGCCAGTGTTCTACCGATCTTCTTCAAGACAAGCCAGTCCTTATTTTCAGGACGAGAGAACATCAAATGTAGTCAATTATCCACGATTTCTGGAAGACAGTTTTCCAGCACAACCGCGCATTCGAGGTACAGGAATGGGATTTAACCCCAGGCTCAGAGAAACTCGCCAGCCATCAGTTCCACCTCGAAGATACGCACGCCAATCAGACACACAAGCTCCAACTTCGCTAGAAAATCCCAGATCTAGAGCATTGAGCAAGCTGAAGAAAGAAATCTACCAACCCACTATTTCAACTTCAAAAACTCTAGCGAAGAAATTGAGCTTCTATTACAGAGACCCTAAAGGTGTGAATGCGTTAAAGGAGATCGAGAACACGGAAAAGAACGAGAAGGGAAAGAGTTGTGCGGTGTGCTTAGAGGATTTCGTGCCGAAACAGGAGGTAATGGTGACGCCTTGCAAGCACATGTTTCATGAGGATTGTATAATGCCATGGCTGAGAAGCCAAGGTCAGTGTCCAATCTGTAGATTTGTGATCTGCGAAAAAGAGAGGGAGAATCCATTGCCGCTGAACGACGACGATGTTGGCACCAATTACCTAATAGCAGGGGAGCTTCTGTCTATTGCGAGGGCCATGGAAGAAGCCTTCCTATTGCGTCCGGAACCTCACTGA 852 0.4707 MPDFTDLQTQSDSYEVPVSYQDFSRPATYVQTTPSPQNPPWYPADRRHAGHYSIPDDSYEVPVFYRSSSRQASPYFQDERTSNVVNYPRFLEDSFPAQPRIRGTGMGFNPRLRETRQPSVPPRRYARQSDTQAPTSLENPRSRALSKLKKEIYQPTISTSKTLAKKLSFYYRDPKGVNALKEIENTEKNEKGKSCAVCLEDFVPKQEVMVTPCKHMFHEDCIMPWLRSQGQCPICRFVICEKERENPLPLNDDDVGTNYLIAGELLSIARAMEEAFLLRPEPH 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral415g00007 283 MobiDBLite consensus disorder prediction 122 141 - -
Pral415g00007 283 MobiDBLite consensus disorder prediction 96 141 - -
Pral415g00007 283 Pfam Ring finger domain 194 236 IPR001841 -
Pral415g00007 283 FunFam RING/U-box superfamily protein 179 253 - -
Pral415g00007 283 ProSiteProfiles Zinc finger RING-type profile. 195 236 IPR001841 -
Pral415g00007 283 SMART ring_2 195 235 IPR001841 -
Pral415g00007 283 SUPERFAMILY RING/U-box 187 243 - -
Pral415g00007 283 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 87 237 - -
Pral415g00007 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 251 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral415g00007 Pral-Chr415 31058 33461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral415g00007 139 278 C3H Transcription Factor Family AT3G58720 46.575 8.95e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral415g00007 - - pcin:129314308 395.586