Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4158g00009 ATGGTTCAAAGACTTGGGACTCGACTCTTCGTGAGCAGATTATCATTCTTCACAACAGATAGCCAACTCAGAAAGCTGTTTTCTCAATTTGGAATAATCACTGAAGCTAGGCTAGTGAAGGACCCAAAAACTCAAAGGCCTAAAGGATTTGGCTTTGTTTCCTATGAGTCAGAAATTGAAGCAGAGAAGGCTATGAACGCCATGAATGGCAGGATAATGGATGGAAGGCTTATTTTTGTGGAACCTGCAAAAGCTACTAGACCTAAAGATGGTGCTTTTTGA 282 0.4113 MVQRLGTRLFVSRLSFFTTDSQLRKLFSQFGIITEARLVKDPKTQRPKGFGFVSYESEIEAEKAMNAMNGRIMDGRLIFVEPAKATRPKDGAF 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4158g00009 93 Gene3D - 3 91 IPR012677 -
Pral4158g00009 93 SMART rrm1_1 8 81 IPR000504 GO:0003723
Pral4158g00009 93 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 85 - -
Pral4158g00009 93 SUPERFAMILY RNA-binding domain, RBD 6 88 IPR035979 GO:0003676
Pral4158g00009 93 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 88 - -
Pral4158g00009 93 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Pral4158g00009 93 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4158g00009 Pral-Chr4158 115519 118079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4158g00009 7 84 Eukaryotic Initiation Factors Gene Family AT2G23350 34.615 1.94e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4158g00009 - K13195 pcin:129306862 157.532