Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4152g00004 ATGGTTCCGAGTAGCCGATTTTTCAGAGCTCATTTTGCTATTAGTGTCTTGCTGCTGTTTGGAATTAGCATCACCAATGGGACTGATGTTGATATTTCCTGCTTGAAAAGCATACAAAATTCACTTGAAGATCCTAATGGTTATTTAAAGTCTTCCTGGAATTTCAATAATAAATCAGAAGGCTATATCTGTCACTTTACTGGGGTTGAGTGTTGGCATGACGATGAGAACAGAGTCTTAAACCTCAAGCTGTCAAATATGGGACTCAAGGGTCACTTTCCTCGTGCCATACAAAATTGCTCAAGCTTAACTGGATTGGATCTTTCAATCAATGATCTTTCTGGAACCATCCCAGCAGATATTGATAAGCTTCTCGGCTTTGTAGTAACCCTGGACCTCTCATCAAATGACTTTTCAGGAGCGATCCCTGTGAACCTTTCAAATTGTTCCTATCTTAATACCCTTAAACTCGATCAAAATCAACTAACTGGTCAAATTCCTCCACAACTTGCCCAGCTTCGACGGATTAAGACTTTTTCTGTCTCAAATAATCTTTTGACAGGGCCTGTTCCATCTTTTGAAAGCAAAGATAGTATAACAGCAGATAGCTATTCAAATAATTCAGGACTTTGTGGGGGTCCCTTGGGGCCATGCCAGGGTAAGAAGGCTAACACTGCAGTTATTGCTGGTGCTGCCGTTGGTGGGGTAACTGTTGCAGCGCTAGCATTGGGTATTGGGGCATTCTTCTTTGTCCGCCGAGTCTCTGTGAAGAAGGAAGAGGATCCTGAGGGAAATAAATGGGCAAGAAGTCTAAAGGGAACGAAAGGAATAAAGGTTTCTATGTTTGAAAAGTCAGTTTCAAAAATGAGATTGAGTGATCTCATGAAGGCAACGAACAACTTCAGTAAAAGCAATATCATTGGTTCAGGAAGAACAGGGACCATGTACAAAGCTGTCCTTCATGATGGGAGCTCAGTGCTCATGGTTAAAAGGTTGCAGGAATCTCAGTACTCAGAAAAGGAATTTGCGTCTGAGATGGCCACACTGGGGACTGTTAGACATCGTAACTTGGTTTCCCTTTTAGGTTTTTGTGTGGCCAAACAGGAGAGGCTTTTGGTGTATAAATATATGGAAAATGGAAGCCTTCATGATCAGCTACATCCTGATACTGATCGGAGCACCATGCAGTGGTCTATAAGGCTAAAAATTGCAATTGGAGCAGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCTCGTATTATCCACCGAAACATAAGCTCTAGGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTTGGCCTTGCTCGATTGATGAATCCAATTGACACACATCTGAGTACTTTTGTAAATGGGGAGTTTGGAGACCTTGGTTATGTTGCTCCTGAATATACAAGAACGCTGGTGGCTACACCGAAGGGGGATGTCTATAGCTTTGGTACTGTGCTTCTAGAGTTGGTGACAGGTGAGAGGCCTACCCATGTGGCGAAAGCTCCTGAAAGTTTCAAGGGAAATTTGTCAGAGTGGATTTCAAATCTCTCAAGCAAATCTGAACTCCAGGATGCTATTGATGAATCACTTCTTGGGAAGGGTGTTGATGGGGAGATTTTCCAATTTCTTAAGGTTGCATGTAACTGTGTTTCACCAAATCCAAAGGAAAGACCCACTATGTTTGAAGTGTACCAGCTTCTTAGAGCAATTGGGAGCAGATACCATTTCACAGCTGATGATGAGATACTGGTACCCACAGATCCTGGCGATGCTGCCAATTTCGAGGAACTTATTGTCGCACGGGAAGAAAATAGTTGA 1845 0.4249 MVPSSRFFRAHFAISVLLLFGISITNGTDVDISCLKSIQNSLEDPNGYLKSSWNFNNKSEGYICHFTGVECWHDDENRVLNLKLSNMGLKGHFPRAIQNCSSLTGLDLSINDLSGTIPADIDKLLGFVVTLDLSSNDFSGAIPVNLSNCSYLNTLKLDQNQLTGQIPPQLAQLRRIKTFSVSNNLLTGPVPSFESKDSITADSYSNNSGLCGGPLGPCQGKKANTAVIAGAAVGGVTVAALALGIGAFFFVRRVSVKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMRLSDLMKATNNFSKSNIIGSGRTGTMYKAVLHDGSSVLMVKRLQESQYSEKEFASEMATLGTVRHRNLVSLLGFCVAKQERLLVYKYMENGSLHDQLHPDTDRSTMQWSIRLKIAIGAAKGLAWLHHSCNPRIIHRNISSRCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTHVAKAPESFKGNLSEWISNLSSKSELQDAIDESLLGKGVDGEIFQFLKVACNCVSPNPKERPTMFEVYQLLRAIGSRYHFTADDEILVPTDPGDAANFEELIVAREENS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4152g00004 614 CDD STKc_IRAK 307 576 - -
Pral4152g00004 614 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Pral4152g00004 614 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 377 589 - -
Pral4152g00004 614 SUPERFAMILY L domain-like 31 193 - -
Pral4152g00004 614 Gene3D Transferase(Phosphotransferase) domain 1 377 591 - -
Pral4152g00004 614 Gene3D Phosphorylase Kinase; domain 1 262 376 - -
Pral4152g00004 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 376 - -
Pral4152g00004 614 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Pral4152g00004 614 Gene3D Ribonuclease Inhibitor 29 219 IPR032675 -
Pral4152g00004 614 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 80 578 - -
Pral4152g00004 614 Pfam Protein tyrosine and serine/threonine kinase 304 575 IPR001245 GO:0004672|GO:0006468
Pral4152g00004 614 FunFam Nuclear pore complex protein NUP107 28 192 - -
Pral4152g00004 614 ProSiteProfiles Protein kinase domain profile. 301 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4152g00004 Pral-Chr4152 23776 26338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4152g00004 16 590 Receptor kinase-like Gene Family AT3G28450 47.774 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pral4152g00004 Pkinase 8.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4152g00004 - - qsa:O6P43_026768 897.501