Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4150g00013 ATGGCTAAGATTAATTGTTTCATCTTCTCTGTGTTATTTCACATTCTATTGAGCTCTGTTTTAACCCAATCAGCACCAGAAAGTGCTCTTGTCACGCAGCTTCCCGGCTTCAATGGCATTATACCTTCCAAGCACTACGCTGGGTATGTGACAGTGGATGAAAGTCATGGAAGGAACCTGTACTATTATTTTGTTGTGTCAGAAAACAAACCTTCTGAAGATCCTGTGGTTCTGTGGCTTAATGGTGGACCAGGCTGCTCTAGCTTTGATGGCTTCATCTACGAGCATGGCCCTTTCAATTTTGAAGCGGCAAAGACTAAGGGAAATCTTCCCACACTGCACCTCAATCCTTACAGTTGGTCAAAGGTCTCCAATGTTTTATATTTGGATTCTCCTGCTGGTGTGGGTTTTTCTTACTCCAAGAATGTATCTGATTACAGAACTGGAGACAAAAAAACCGCCTCTGATACGCACACTTTTCTCCTTAAGTGGTTTGAACTTTTCCCTGAGTTCCTGCCCAACCCGTTCTTTGTTGCTGGCGAGTCATTTGCTGGAATTTATGTGCCTACTCTTTCTTCTGAAATAGTGAAAGGAATTGATGCTGGTGTAAAGCCCAATCTGAATTTCAAGGGTTATATGGTAGGAAATGGTGTTACAGATGAAGATTTTGATGGCAATGCACTGGTTCCATTTGCTCATGGGATGGGCCTTATCTCAGATGATCTTTATGAGGAGGTTAGAACTGAGTGCAATGGGAATTTCTACCAACCACTTGGTCAAACATGTGCAGAAAAGCTTGCAAAAGTTGATGAGGATGTGTCTGGGTTAAACATATATGATATTCTAGAACCATGCTACCATGGCCCCAGTACAGAGAAAGTCATGGCATCGAAGATCAGATTGCCGTCGAGTTTCTTGAAATTGGGTGCAACAGATAGATCATTGCCTGTGAGAAAAAGGATGTTTGGCCGTGCTTGGCCGCTTAGAGCTCCTGTGAAAGATGGAATTGTACCAACTTGGCCTCAACTTAGCAATTCCAATAGTGTTCCATGCACGAATGATGAGGTTGCAACTGCGTGGTTGAATGATAAAACAGTTAGGAAAGCACTTCACACTGCAGAGGAAAGTGTGGTGAGTAGGTGGGATCTATGCACAGACAATATTGTATACCATCACGATGCAGGGAGCATGATCAATTATCACAAGAACCTCACTTCCAGAGGATATAGAGCACTCATATACAGTGGTGATCATGATCTGTGTGTTCCTTACACGGGAAGTGAAGCTTGGACAAGATCACTTGGATACAAAATCCTAGATGAATGGAGGCCTTGGATGTCCAATGATCAAGTCGCCGGGTACACTCAGGGATATGAAAAGAATCTAACTTTTCTGACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAACCAAGAGAGTCATTGGATTTCTACAAGCGCTTTTTGAAGGGTCTGCCTTTTTGA 1488 0.4294 MAKINCFIFSVLFHILLSSVLTQSAPESALVTQLPGFNGIIPSKHYAGYVTVDESHGRNLYYYFVVSENKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGNLPTLHLNPYSWSKVSNVLYLDSPAGVGFSYSKNVSDYRTGDKKTASDTHTFLLKWFELFPEFLPNPFFVAGESFAGIYVPTLSSEIVKGIDAGVKPNLNFKGYMVGNGVTDEDFDGNALVPFAHGMGLISDDLYEEVRTECNGNFYQPLGQTCAEKLAKVDEDVSGLNIYDILEPCYHGPSTEKVMASKIRLPSSFLKLGATDRSLPVRKRMFGRAWPLRAPVKDGIVPTWPQLSNSNSVPCTNDEVATAWLNDKTVRKALHTAEESVVSRWDLCTDNIVYHHDAGSMINYHKNLTSRGYRALIYSGDHDLCVPYTGSEAWTRSLGYKILDEWRPWMSNDQVAGYTQGYEKNLTFLTIKGAGHTVPEYKPRESLDFYKRFLKGLPF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4150g00013 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Pral4150g00013 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Pral4150g00013 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Pral4150g00013 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Pral4150g00013 495 FunFam Carboxypeptidase 24 308 - -
Pral4150g00013 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Pral4150g00013 495 Pfam Serine carboxypeptidase 35 492 IPR001563 GO:0004185|GO:0006508
Pral4150g00013 495 SUPERFAMILY alpha/beta-Hydrolases 31 494 IPR029058 -
Pral4150g00013 495 Gene3D - 348 495 - -
Pral4150g00013 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 479 IPR001563 GO:0004185|GO:0006508
Pral4150g00013 495 FunFam Carboxypeptidase 350 494 - -
Pral4150g00013 495 FunFam Carboxypeptidase 397 492 - -
Pral4150g00013 495 Gene3D alpha/beta hydrolase 23 328 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4150g00013 Pral-Chr4150 79111 84571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4150g00013 356 495 Calmodulin-binding Proteins AT2G22960 50.000 1.77e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4150g00013 K16296 - cave:132166195 821.617