Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4149g00054 ATGGAGCTTCTGGCATTTCCCAGCTTTGAGGCAATTTCTAAGGTTTCATTATTCCCCTTTTCTTCCAAACAAGTTTTGTATGGAAACTCTGTTCGTTGCCGGAACATTGGGTTCCTATGGTGTCGAAATTCGAAATCTTTTGCTGGAATCACCATGAGTTCAGATGAAGATTCCTTATCAAATGATTATGGACTAAGACAGAGCCTTGGAACTAAATCTGGAGCTATCGACGTGATTGGCATTGGCAGCAGAAAGGACGCAGTTCTAGATTTCTGCTTAAAGTCGCCTTTTCAGCTATCGTCGCTGCGATTTTGGAATATTCTCATGAAGGAATCTCAAGAGGTTCAATTACAACTAAGGTCTTATGAAGAAGATTCTCTTCCAAGAATTGTCAAAGCTCCATTATTTATGAAGTCATGCTCATCGACTATTATTCTTGTAGCTAGTGCAGGATATGGATCAGACCACTCTGTTGCAATTGATGTTTTCAAAACTATAAAGTCATCAAATGGATTAACTGTTGCTATTATCTTGAAGCCTTTTGTCTTTGAAGGGTTGAGGCGACAAGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTCTTGAAATTGATATTGATTCACTACTTAAAAAGGACTTGGTGACTCTAGATGAAGCTATGAAAACTGCAAATGATGCGGTTTTGTTGGCCATTAATGCCATATCTGTTCTCAAATCCGAGATGCACAGGAAACTTACAGATGGTCTGGACACTGGTGCCATGAAAGAAGTCAGTAATTTGGAAATTAATAAAATATTTGAAAGCAATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCAATTCTACAGTCTTTATTTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATGGCATGATTATATGCAATCTCACAAGTTCAGTTCATATGAATGACAATGATATCGCTGCCTTTCTGCATACTTTCCGTCAAACAACAGGATACACAAAGGAAATAATAATAACTACAGATCATGAGCCTAATCTTGAGCCAAACCTGCTGATCACCACTGTTCTTACACTGGGCAGCATTAATATGCAACAGCGTTCCCAGAGTGGTGGCATGCTTTCTAGACTGGCCCAGCATTTTCCTCTTCTTTGCCGCTTTTGGGGGGGACATCAAAATGAACCAGCTGACTCTAGGAAAGAGAATTTAACTGGAAGTATAGCTCCTTCTCAAGTGACTAAATTATATGAATTTAATGATGGGGATAGAATTGCTTCTGATGAGATAGATGAGAAGTTTGATAAGGATTTTGAATCTCTGGAGCCAACTGTGGGTAATAAAACTGTGAAGTCAAACGAATCAAGGCGTTCTGAACAAAACAAGGGAGAACAATTTGACACAAGTTCCGAGTGTTCCAGCCTTAACGATGAAATTACTAGAGGCGACTCTGCTTGTCGAAGGGAGAAACTCATAAATTGGAATCTTGGTCCTGGATATGAGGTTGCACAGGAGTGGGCCAAACAAAGGGCAGCTGATGCTACTACTCCAACAGCTGATAATATTAGCATCTTCAACCTTCCTGTTGGTATCAGATCTTCAGAACAGTTAAAAGACTGTCCAGAAGTCTCTGCGGCACAAGAGCCAGCGACTGAAAACGATGTCAAAGTACCTAACAAAAGCATGTCCTGGAGTGCATTGACTGATGCAGGTCTGGAAGCAGTGATGGATTTTACATCTACTCTTTTAAATGGAAAGTATGCAGACAAATCAAACCAGCAAGGGGTTCTTTCTGTTCGAGCAGCATCCATGCTGGAAGCAGAACGTGATTCATCCAAAAAATGGATCCCACTTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGACTTGTCCTCAGAGATGGAAGTATATATGATGGTACATGGCGCTATGGTAAGAGATCAGGTCCTGGCACATTGTATTTCATCAATGGCGACGTGTTCCAAGGATCGTGGAGGGACGATCTCATGCACGGCAAAGGTTGGTTTTATTTTCACACACGGGATAGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCAAATGGTGAAGGCCGTTTCTACACAAAGAATGGGGATGCCTTCTTTGGAAATTTTAAAGATGGATGGCGACACGGGCAATTTCTATGCATCAATGCAAAAGGAAGAAGGTATATTGAGATTTGGGAATATGGTGTTATTGTAGAAAGCAAGCATTTAGACAAAGATGACGTTCAGGTCAAAAAAGACAAAGATGACGGAGAAGAATGA 2346 0.4071 MELLAFPSFEAISKVSLFPFSSKQVLYGNSVRCRNIGFLWCRNSKSFAGITMSSDEDSLSNDYGLRQSLGTKSGAIDVIGIGSRKDAVLDFCLKSPFQLSSLRFWNILMKESQEVQLQLRSYEEDSLPRIVKAPLFMKSCSSTIILVASAGYGSDHSVAIDVFKTIKSSNGLTVAIILKPFVFEGLRRQDEVKNLVEKLKENTDLLLEIDIDSLLKKDLVTLDEAMKTANDAVLLAINAISVLKSEMHRKLTDGLDTGAMKEVSNLEINKIFESNKEARIGFGAAYNMKTSILQSLFDCPFLGVSLKDSNGMIICNLTSSVHMNDNDIAAFLHTFRQTTGYTKEIIITTDHEPNLEPNLLITTVLTLGSINMQQRSQSGGMLSRLAQHFPLLCRFWGGHQNEPADSRKENLTGSIAPSQVTKLYEFNDGDRIASDEIDEKFDKDFESLEPTVGNKTVKSNESRRSEQNKGEQFDTSSECSSLNDEITRGDSACRREKLINWNLGPGYEVAQEWAKQRAADATTPTADNISIFNLPVGIRSSEQLKDCPEVSAAQEPATENDVKVPNKSMSWSALTDAGLEAVMDFTSTLLNGKYADKSNQQGVLSVRAASMLEAERDSSKKWIPLVEMQYRGGQYKGRCQGGLPEGKGRLVLRDGSIYDGTWRYGKRSGPGTLYFINGDVFQGSWRDDLMHGKGWFYFHTRDRWFANFWKGKANGEGRFYTKNGDAFFGNFKDGWRHGQFLCINAKGRRYIEIWEYGVIVESKHLDKDDVQVKKDKDDGEE 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4149g00054 781 Gene3D Tubulin/FtsZ, GTPase domain 110 367 IPR036525 -
Pral4149g00054 781 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 632 759 - -
Pral4149g00054 781 SUPERFAMILY Tubulin nucleotide-binding domain-like 76 242 IPR036525 -
Pral4149g00054 781 SMART morn 633 654 IPR003409 -
Pral4149g00054 781 SMART morn 679 700 IPR003409 -
Pral4149g00054 781 SMART morn 656 677 IPR003409 -
Pral4149g00054 781 SMART morn 725 746 IPR003409 -
Pral4149g00054 781 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 100 770 - -
Pral4149g00054 781 Gene3D - 707 778 - -
Pral4149g00054 781 Gene3D - 630 706 - -
Pral4149g00054 781 Pfam MORN repeat 640 656 IPR003409 -
Pral4149g00054 781 Pfam MORN repeat 681 700 IPR003409 -
Pral4149g00054 781 Pfam MORN repeat 708 725 IPR003409 -
Pral4149g00054 781 Pfam MORN repeat 658 680 IPR003409 -
Pral4149g00054 781 MobiDBLite consensus disorder prediction 443 486 - -
Pral4149g00054 781 MobiDBLite consensus disorder prediction 472 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4149g00054 Pral-Chr4149 326137 334370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4149g00054 1 769 PP2C-type Phosphatase Gene Family AT1G75010 43.517 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4149g00054 - - gsj:114371951 964.526