LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4148g00043	ATGCCCAGCTATTTCAATTTGGTGGTTTTTGCCGCGAAGCAACGGCCCTCCGTGTTCGTGGTCTGCTCTATCCCGCCAAAACCAGTCTACCTTGCTTCTGTGGATACGTTGCCCTATGGTCTCCTCCGGTCCTGCTGCTACTCCGAACTAGACTCGCTTTCTCTGAGCATGGTTGCTTTCCGTGCTCTGAGATCTTCAAAGCTCATCTCATGGAAACCGACTGGCAGGCTTCAGCAAACCCTAGCAGGTTGTGTAGAGCGGCGAGGTAACACTTTACACTCTGGGAAGGCTTCAGTAGTCAAACTCGGTCCTGGATTTGTAGGAGAAGGGAGGTATTTCGATTTCCGGTCCAATTCGATACCAGCGTCGATTGATTTTGCTCACCAGTCACCTCTCTGCACCACATTGTGCAAAGATGGTTTCAGAGTACGAACTGTTGAGCACTTGCTTTCTGCTTTGGAGGCGACTGGTGTTGATAATTGCAGAATTGAGATAGAAAATGTGGATTCTGGAGGAGATTGTGCTGAGATCCCCATATTTGATGGGTCAGCTAGTGAATGGGTAGCAGCGGTGGAAGAAGTTGGCTTAAAGGTGGCAACTGATCACCACGGCAATAGTTGTGAAAAATTAGCTCCACATCTGAATGAACCAATGTACGTTTTCAGGAATGATTCTTTTGTTGCTGCATTTCCTTCAACAATGGTTCAAATAACATATGGAATTAACTTTCCTCAGGCAAGTGCTATTGGATTGCAGTGGTTTTCAACCCCTTTGGATAAGTTACTTTATTCCAAACAGATAGCTTTGTCGAGAACCTTCTGCATTCATGAGGAGATTGAACAAATGCGCAATGCTGGACTGATTAAAGGGGGTAGTCTAGAAAATGCCATTGTTTGCAGTGCCCATAATGGTTGGTTAAATCCACCTTTGCGTTTCGATGATGAACCATGTCGCCATAAGGTCCTAGATCTTATAGGAGATCTTTCCCTTTTTGCTCAGTTTGGGAATCAAGGGGTCCCAGTGGCACACGTTGTAGCTTACAAGGCGGGCCATGCATTGCATGCTGATCTGGTACGCCGCCTAATGGGAACGATTTGA	1098	0.4645	MPSYFNLVVFAAKQRPSVFVVCSIPPKPVYLASVDTLPYGLLRSCCYSELDSLSLSMVAFRALRSSKLISWKPTGRLQQTLAGCVERRGNTLHSGKASVVKLGPGFVGEGRYFDFRSNSIPASIDFAHQSPLCTTLCKDGFRVRTVEHLLSALEATGVDNCRIEIENVDSGGDCAEIPIFDGSASEWVAAVEEVGLKVATDHHGNSCEKLAPHLNEPMYVFRNDSFVAAFPSTMVQITYGINFPQASAIGLQWFSTPLDKLLYSKQIALSRTFCIHEEIEQMRNAGLIKGGSLENAIVCSAHNGWLNPPLRFDDEPCRHKVLDLIGDLSLFAQFGNQGVPVAHVVAYKAGHALHADLVRRLMGTI	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4148g00043	365	Gene3D	lpxc deacetylase, domain 2	213	364	IPR011334	GO:0008759\|GO:0009245
	Pral4148g00043	365	PANTHER	UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED	58	363	IPR004463	GO:0008759\|GO:0009245
	Pral4148g00043	365	Pfam	UDP-3-O-acyl N-acetylglycosamine deacetylase	78	362	IPR004463	GO:0008759\|GO:0009245
	Pral4148g00043	365	SUPERFAMILY	Ribosomal protein S5 domain 2-like	216	362	IPR020568	-
	Pral4148g00043	365	SUPERFAMILY	Ribosomal protein S5 domain 2-like	77	197	IPR020568	-
	Pral4148g00043	365	NCBIfam	UDP-3-O-acyl-N-acetylglucosamine deacetylase	78	362	IPR004463	GO:0008759\|GO:0009245
	Pral4148g00043	365	Gene3D	lpxc deacetylase, domain 1	76	203	IPR015870	GO:0008759\|GO:0009245

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4148g00043	58	361	Carbohydrate Esterase	AT1G25054	63.279	3.28e-143	407

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4148g00043	K02535		-	qsa:O6P43_025917	485.337