Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4148g00036 ATGAATATTCTTAAGAAGGCGATCAATGCCCCACCTAGTCTCAGATGGACAGACGCTGACGTTTGCAAATGGCGACGAGTGAATTGCAACGCTGGAAAAAGTGTCATTTCCATCCAGATTGGGAACTTGAATTTGCAAGGTTTGCTTCCAAAAGAACTCGAGAATCTCTCAGAGTTGCAGCAATTTGAATGCCCACAAAACAATCTGACGGGTCAATTTCCATATCTATCCAAGACACTACACAGACTTGTGATCCCAGATAACAAGTTCAGTTCCATCCCCAGAGACTTCTTTAAAGAAATGACAATGTTACAAGAAGTAAGAATTGGAAAGAACCCATTTTCGCCATGGTCTATCCCAGACAGTCTTAAGGATTGCGTAGCACTCCAGACATTCATTGCAACAAATGCAAATTTGGTTGGAACAATCCCAGATTTTTTGGGTACTATGGCAGGTTTAATTTCTTTAGTCTTGAATTCTAATAGTCTTGAAGGTGGGCTGCCCGTGAGTTTTGCGAATAGTTCAATTGAGGAGCTTTTGTTGAACACACAAAATGGTAACTATAAACTCAATGGCACAATTAAGGTGCTACAAAACATGACATCCTTAAAGAAAGTTTGGCTACATGGTAATTCATTTACAGGTCCAATACCAGACTTGTCAAACCTTGGTCAGTTGTTTGATGTGAGTGTAAGGGACAACCAACTGGCATGTGCAGTCCCATCATCTCTCATGGCTCTTCCAAGATTGCAGGTTGTGAATTTGACTAACAATTTCCTTCAAGGCCCCATTCCAACATTTAAATCGAGTGTGGTTGTTGATGTGTCTGGGATTAATCGGTTTTGCACAAACATCACAAATCAGCCATGTAGTTCCCTTGTGAATGCTTTGCTCTCTGTTGTTGAACCCTTGGGATGTCCAGTGAAATTGGCTGATAATTGGAAGGGCAATGATCCCTGTAATGGTAGCTGGACAGGAATAGTGTGCTCTGGGGGGAACATTTCAATTGTTAATTTTCAAGATATGGGTTTATCAGGCACGATTTCTCCAACTTTTGCCTCACTTACTTCTGTAACAAAATTGCTTCTTGCCAATAATTCACTTATGGGCCCTATACCAAATGAGCTCACTACCATGCCCAATCTACGAGAGCTAGATGTTTCAAATAACAATTTAGAAGGTTATGTGCCATCTTTTCCTAAAAAAGTCATGATTATTAGGAAAGATGGGAATCCTAATCTTGGAAAACCTCTTAAATCACCTAGCTCAAGTTCTAGGGGCAATGGTACTAAGAAAATGGACCAGCTTTCTACATTCATTGCGGGCATTGCCGTTGGTTTAATGATTTTACTTATTATATTGGTCATAGTTTCTTACGTGATTGTTAAAAAACGTAATTATTTTGGCAAGTTTAGAGGTCTGATAACGAAGTTAATACGTCCTCGTGATGGTGAAGTTGGAAAAGGCATGAAGATTTATGTTGAAGGTGCTGGTGCTCCTAGTCAAGCTGATGTTCAAGGTATGGTAATTCCAATTCAAGTTTTGAAAGAAGTCACTAACAATTTTAGTAATGCAAACATACTTGGAAAGGGTGGATTTGGCACTGTGTACAAAGGTGAACTACATGATGGATCAAAGATTGCAGTGAAAAGAATGGAATCAGGATTGTTGCTGGAGAAGGGACTAAGTGAATTCCGAGCTGAAATTGCAGTGCTTACGCAAGCTCGTCACAAACATTTGGTGGCACTTCTGGGATACTGCTTGGATGGAAATGAGAAGCTTCTTGTATATGAATACATGCCCCAAGGAGCACTGAGTAAGCATTTGTTTAGGTGGAAAGAGAATGGGTTGGAACCTCTGGATTGGACAAGAAGACTAAACATTGCCTTGGATGTAGCTAGAGGCGTTGAGTATCTTCATGCCTTAGCTCAACAAAGTTTTATTCATAGGGATCTTAAGCCATCCAACATTCTTCTGGGGGACGATATGGGAGCTAAAGTATCAGACTTTGGATTAGTCCGGCTTGCTCCTGAAGGAAGAAATTCAGTTGAAACAAGGCTGGCCGGAACTTTCGGATATCTTGCACCTGAGTATGCAGCAACTGGGCGGGTTACTACAAAGGTTGATGTGTACAGTTTTGGAGTAGTTCTGATGGAGATGATAACGGGGAGGAGAGTGCTTGATGATAGCCTGCCAGAGGAAGACTTCCACTTGGTTATGTGGTTCCGACGAATGATGCAGAACAATGACTCGTTTCGAAGGGTCATTGATCCTATCATTGATGCTGATGATGAAGCAACCATGTGCAGCATTAGGACTGTCTCAGAGCTGGCTGGCCATTGCTGTGCCAGTGAGCCTCATCAACGTCCAGACATGGGCTATATAGTGAACTTACTCTCGCCTCTTGTCCAGGCAGCATGGAAGCCCATGGAGTCAAGTTCTTCTGATGATGGCAAGTATGGCATTGATTTTGACATGAGTTTGCCCCAAGCACTTAGCAAATGGCAATCTTTGGAAGGAAAAAGCTGTTCAATGGTGAAAGGATCTTCTTCGCAATCATTTGTCACAAAATAA 2574 0.4165 MNILKKAINAPPSLRWTDADVCKWRRVNCNAGKSVISIQIGNLNLQGLLPKELENLSELQQFECPQNNLTGQFPYLSKTLHRLVIPDNKFSSIPRDFFKEMTMLQEVRIGKNPFSPWSIPDSLKDCVALQTFIATNANLVGTIPDFLGTMAGLISLVLNSNSLEGGLPVSFANSSIEELLLNTQNGNYKLNGTIKVLQNMTSLKKVWLHGNSFTGPIPDLSNLGQLFDVSVRDNQLACAVPSSLMALPRLQVVNLTNNFLQGPIPTFKSSVVVDVSGINRFCTNITNQPCSSLVNALLSVVEPLGCPVKLADNWKGNDPCNGSWTGIVCSGGNISIVNFQDMGLSGTISPTFASLTSVTKLLLANNSLMGPIPNELTTMPNLRELDVSNNNLEGYVPSFPKKVMIIRKDGNPNLGKPLKSPSSSSRGNGTKKMDQLSTFIAGIAVGLMILLIILVIVSYVIVKKRNYFGKFRGLITKLIRPRDGEVGKGMKIYVEGAGAPSQADVQGMVIPIQVLKEVTNNFSNANILGKGGFGTVYKGELHDGSKIAVKRMESGLLLEKGLSEFRAEIAVLTQARHKHLVALLGYCLDGNEKLLVYEYMPQGALSKHLFRWKENGLEPLDWTRRLNIALDVARGVEYLHALAQQSFIHRDLKPSNILLGDDMGAKVSDFGLVRLAPEGRNSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDDSLPEEDFHLVMWFRRMMQNNDSFRRVIDPIIDADDEATMCSIRTVSELAGHCCASEPHQRPDMGYIVNLLSPLVQAAWKPMESSSSDDGKYGIDFDMSLPQALSKWQSLEGKSCSMVKGSSSQSFVTK 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4148g00036 857 Gene3D Transferase(Phosphotransferase) domain 1 600 820 - -
Pral4148g00036 857 MobiDBLite consensus disorder prediction 410 430 - -
Pral4148g00036 857 Gene3D Phosphorylase Kinase; domain 1 496 599 - -
Pral4148g00036 857 PANTHER OSJNBA0070M12.3 PROTEIN 1 846 - -
Pral4148g00036 857 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Pral4148g00036 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Pral4148g00036 857 Gene3D Ribonuclease Inhibitor 292 417 IPR032675 -
Pral4148g00036 857 SUPERFAMILY L domain-like 294 399 - -
Pral4148g00036 857 Pfam Protein tyrosine and serine/threonine kinase 526 798 IPR001245 GO:0004672|GO:0006468
Pral4148g00036 857 SUPERFAMILY Protein kinase-like (PK-like) 506 799 IPR011009 -
Pral4148g00036 857 SUPERFAMILY L domain-like 4 269 - -
Pral4148g00036 857 CDD STKc_IRAK 528 802 - -
Pral4148g00036 857 Gene3D Ribonuclease Inhibitor 1 288 IPR032675 -
Pral4148g00036 857 SMART serkin_6 522 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4148g00036 857 MobiDBLite consensus disorder prediction 416 430 - -
Pral4148g00036 857 FunFam receptor protein kinase TMK1 600 819 - -
Pral4148g00036 857 Pfam Leucine rich repeat N-terminal domain 312 330 IPR013210 -
Pral4148g00036 857 Pfam Leucine rich repeat N-terminal domain 4 30 IPR013210 -
Pral4148g00036 857 FunFam Receptor-like kinase TMK4 1 287 - -
Pral4148g00036 857 FunFam receptor-like protein kinase FERONIA 492 599 - -
Pral4148g00036 857 FunFam Leucine-rich repeat receptor-like kinase 292 417 - -
Pral4148g00036 857 ProSiteProfiles Protein kinase domain profile. 522 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4148g00036 Pral-Chr4148 410352 413110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4148g00036 35 792 Receptor kinase-like Gene Family AT5G07280 31.470 5.13e-83 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pral4148g00036 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4148g00036 K00924 - gmx:100776064 996.112