Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4148g00022 ATGGAGGGTCGTAGAATTGGTGAGTATGGAAGTGGGAGAGAAAATGACGGAGAGAAACTAATAAGGGATGATGATCATGAGGTTCTGAAAAAGATGATTTCCAGTCATCCTCTTTATGGTCTTTTGATTGAATCTCACTTCAACTGTTTGAAGGTGGGGTTAGGCGAATCTGGAGAAGAGTTTGATCTAACAGAAGCTGCATGTAAGCAGAAGGCAAATTCTGGGCTCAAAACAGCTTCAACTCCGAGTTCTGCAGAACTTGATCAATTCATGGAAGCATATTGCATGGCCCTCAGCAGCCTGAAAGAAGCCATTGAAGAACCAACAAAAGAAGCAAGAGCGTTCATCAATTCAATGCACGTTGAGCTGAAGGAACTATGCAATCCGAATCATACTAATAATAATAATCATAACAAGCCACAAGATGCTATAGAGTGCAGCAGCAAGAAGAATCTTTGA 459 0.4118 MEGRRIGEYGSGRENDGEKLIRDDDHEVLKKMISSHPLYGLLIESHFNCLKVGLGESGEEFDLTEAACKQKANSGLKTASTPSSAELDQFMEAYCMALSSLKEAIEEPTKEARAFINSMHVELKELCNPNHTNNNNHNKPQDAIECSSKKNL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4148g00022 152 SMART KNOX2_2 77 128 IPR005541 GO:0003677|GO:0005634
Pral4148g00022 152 Pfam KNOX2 domain 85 127 IPR005541 GO:0003677|GO:0005634
Pral4148g00022 152 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 15 131 - -
Pral4148g00022 152 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Pral4148g00022 152 SMART KNOX1_2 27 73 IPR005540 GO:0003677|GO:0005634
Pral4148g00022 152 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4148g00022 Pral-Chr4148 340575 341835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4148g00022 25 135 Homeobox Transcription Factor Family AT4G08150 35.652 9.57e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4148g00022 - - pcin:129321621 231.106