Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00055 ATGACTTCTTCTTCTTCTTGGCCAGTGATGGCCTTTGCAATTGCTTCTGCTGTTTGTGTGTTCTTCAGCTGCTTCGTTGCTGTATTATCACAAGATCAAAACCTTACCACCGATCCTTCGGAAGCGAGAAGTGTGAATAGAATATTCGAGAAATGGGGGATATCGGCATTAGCAAATGTGTGGAATATCAGCGGTGAGCCATGCAGTGGAAGAGCCGTCGATAGCACCACCACCATTGGCTCCTTAAATCCATTCATCAAATGCGACTGCTCTGGTGGCACCACCTGCCACATTACTGCACTGAGGGTTTACGCATTGGATGTTGTTGGGGAAATCCCAGAAGAGCTATGGACTCTAACTCGCCTCACCGACTTGGACATTCGGCAGAATTACTTGACAGGTTCTCTACCTCCAGCCATAGGAAATCTAACTAGTATGCAGTACATGTCCCTTGGCATCAATTCTTTATCAGGGGAGATTCCGAAGGAACTGGGAAATCTTACCGAGTTAATAGTATTGAGTCTTGCATCAAACAGCTTCTCAGGTTCCATTCCGTCCGAGCTAGGGAATCTGGTGAAATTGAAAGAACTCTACTTAATTAGTTCGGGACTTGGTGGTCAGATTCCTCCTACATTTGCTAATCTTAAAAACCTGCTGACATTCTGGGCTTCAGATATGGAACTCACTGGCAGGATACCTGACTTCATAGGAAGTTGGTCTAAGCTCAAAGGCTTGAGGCTTCAGGGTAATTCCTTTGAAGGACCAATACCATCATCATTGGGAAATCTGACTTTTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGACCTCCTCACTAGCATTTATAAGGAATCTGAAGTCTTTGAATATCTTAGTATTGAGAAATAACAATATTTCTGATTCAATTCCATCAGACATTGGTGAATTTCAGAATTTGACACAGCTGGATTTGAGCTTCAACTATATCACGGGACAGATTCCAGGATCACTTTTCAATCTGCGTTCACTAGCTTACTTATTTCTTGGAAACAACAAACTCAATGGCACTATCCCTCCACAGATAAGCCTGTCTCTTCTCAATATAGATTTGTCCTACAACAGTCTGTCAGGAGGCCTCCCTTTTTGGGTGAACCAACCAAATTTACAAGTTAATTTGGTTGCAAACAACTTGACAATAAATTACTCAGACAGCAGTGGCCTTCCTTCTGGACTTGAATGTTTGCAACATAATTTTCCCTGTTTTCGAGGTCCTGGAAGATATTATGACTTTGCTATCAAGTGTGCTGGTCCTCAAATTACAACATCAGATGGAACTAAATTTGAAAGTGAGAAGGAGACACTTGGTGCTGCTACTTATTTTGTTACTGATACAAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGTTCACACAATCCTCTATATAACAGATCTGTGCTTAGTCAGTTCACTAATACCTTGGACCCAGAGCTCTTCCAGACTGCTAGGATCTCTCCTTCTTCATTAAGATATTATGGCCTGGGCCTCGAAAATGGGGATTACAATATCTCCCTCTATTTTACAGAAATGTCTATTTTAGATACTACTACATGGAAAAGTTTAGGAAGACGATTTTTCGATATTTATATCCAGGGGAATCTTGTTTGGAAGGATTTTAACATAAAAAGGGAAGCTGGGGGAGCCTCTTTTAGAGCTGTCCAAAAGGATTTTCGTGCTCATGTGTCAGAAAACTATCTCGAGATCCATCTCTTTTGGGCTGGAAAAGGGACATGCTGTATACCAGACCAAGGTACTTATGGCCCTATGATTTCAGCTATCAGAGCTAGCCCAGATTTCATTCCCACGGTTAGCAATAGACCTCCAACCAATAAAAAGGACAGAACTGGTTTGATTGTGGGAATTGTTGTTGGTATTGGAGTAGTAAGCTTTCTGTCTTTTCTTGGGGTTTTCTGTATCATTCAAAGAAGAAAGCATCATGAAGATGGCAATGAAGAGCTATTAGGTATTGATATGAAGCCATACATGTTCAACTATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCTAGCAACAAGTTAGGCGAGGGAGGTTTTGGTCCTGTTTATAAGGGAACACTTAATGATGGAAGATTAACTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAAAGCCAGTTCATAGCTGAGATTGCTACTATATCTACTGTGCAACATCGTAATCTTGTTAAATTATATGGATGTTGCATTGAAGGAAATAAAAGGCTTCTTGTTTATGAGTATCTAGAAAATAAGAGTCTTGATCAAGCATTATTTGAAAATTGTTTAACTCTCAACTGGCCCACACGCTATGATATCTGCATGGGCATAGCAAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTTCGCATTGTGCATCGAGATGTAAAGGCTAGTAATATCTTGCTTGATCGCGAGCTTGTCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATACGATGATAAAAAGACGCATATAAGCACTCGTGTAGCTGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCAGATGTGTTTTCTTTTGGTGTTTTGGCCCTTGAGATAGTTAGTGGAAGGCTGAATTCTAATTCAAACTTGGAAGGGGAGAAGATCTATCTACTAGAATGGGCTTGGCAGCTGCATGAAAATAACTGTATAGTTGAACTGGTAGATCCTAAACTATCATCAGATTTCAATGAGGAAGAAGTTAAAAGAGTTGTAGGGATATCTCTTCTGTGCACTCAAACTTCACCACTGGCAAGGCCAGCAATGTCTCGAGTAGTGGCAATGCTTTCTGGAGATATGAAAGTGAGCACTGTAAGTTCAAGGCCTGGTTACTTGGTGGACTGGAAATTTGATGATGAGTATAGCTTCATGACTGGCTTGGCCACAAAGGGATCAGAGACGGGTCAGTATAACTCATCCACAACTACGACCATTGTCACTGCTTCAACTGCAAACCAATCACCTGTAGACGCTTCTAAACCCATGCTACGTCACATTCTTAGTGAAGGTAGATAA 3105 0.4106 MTSSSSWPVMAFAIASAVCVFFSCFVAVLSQDQNLTTDPSEARSVNRIFEKWGISALANVWNISGEPCSGRAVDSTTTIGSLNPFIKCDCSGGTTCHITALRVYALDVVGEIPEELWTLTRLTDLDIRQNYLTGSLPPAIGNLTSMQYMSLGINSLSGEIPKELGNLTELIVLSLASNSFSGSIPSELGNLVKLKELYLISSGLGGQIPPTFANLKNLLTFWASDMELTGRIPDFIGSWSKLKGLRLQGNSFEGPIPSSLGNLTFLTELRISEISNGTSSLAFIRNLKSLNILVLRNNNISDSIPSDIGEFQNLTQLDLSFNYITGQIPGSLFNLRSLAYLFLGNNKLNGTIPPQISLSLLNIDLSYNSLSGGLPFWVNQPNLQVNLVANNLTINYSDSSGLPSGLECLQHNFPCFRGPGRYYDFAIKCAGPQITTSDGTKFESEKETLGAATYFVTDTRRWAVSNVGLFTGSHNPLYNRSVLSQFTNTLDPELFQTARISPSSLRYYGLGLENGDYNISLYFTEMSILDTTTWKSLGRRFFDIYIQGNLVWKDFNIKREAGGASFRAVQKDFRAHVSENYLEIHLFWAGKGTCCIPDQGTYGPMISAIRASPDFIPTVSNRPPTNKKDRTGLIVGIVVGIGVVSFLSFLGVFCIIQRRKHHEDGNEELLGIDMKPYMFNYSELKNATDDFNPSNKLGEGGFGPVYKGTLNDGRLTAVKQLSVGSHQGKSQFIAEIATISTVQHRNLVKLYGCCIEGNKRLLVYEYLENKSLDQALFENCLTLNWPTRYDICMGIARGLAYLHEESRLRIVHRDVKASNILLDRELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRLNSNSNLEGEKIYLLEWAWQLHENNCIVELVDPKLSSDFNEEEVKRVVGISLLCTQTSPLARPAMSRVVAMLSGDMKVSTVSSRPGYLVDWKFDDEYSFMTGLATKGSETGQYNSSTTTTIVTASTANQSPVDASKPMLRHILSEGR 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00055 1034 SMART serkin_6 691 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00055 1034 Gene3D Ribonuclease Inhibitor 91 196 IPR032675 -
Pral4145g00055 1034 Gene3D Ribonuclease Inhibitor 197 413 IPR032675 -
Pral4145g00055 1034 SMART LRR_typ_2 167 191 IPR003591 -
Pral4145g00055 1034 SMART LRR_typ_2 335 359 IPR003591 -
Pral4145g00055 1034 SMART LRR_typ_2 119 143 IPR003591 -
Pral4145g00055 1034 SMART LRR_typ_2 287 311 IPR003591 -
Pral4145g00055 1034 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Pral4145g00055 1034 Gene3D - 423 612 - -
Pral4145g00055 1034 ProSiteProfiles Leucine-rich repeat profile. 313 335 IPR001611 GO:0005515
Pral4145g00055 1034 Gene3D Transferase(Phosphotransferase) domain 1 767 971 - -
Pral4145g00055 1034 FunFam Leucine-rich repeat receptor-like protein kinase 422 613 - -
Pral4145g00055 1034 Pfam Malectin domain 424 609 IPR021720 -
Pral4145g00055 1034 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00055 1034 CDD STKc_IRAK 697 959 - -
Pral4145g00055 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 992 - -
Pral4145g00055 1034 FunFam Leucine-rich repeat receptor-like protein kinase 660 766 - -
Pral4145g00055 1034 FunFam Os05g0263100 protein 42 276 - -
Pral4145g00055 1034 SUPERFAMILY L domain-like 97 409 - -
Pral4145g00055 1034 Pfam Protein tyrosine and serine/threonine kinase 694 959 IPR001245 GO:0004672|GO:0006468
Pral4145g00055 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 767 971 - -
Pral4145g00055 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Pral4145g00055 1034 Gene3D Phosphorylase Kinase; domain 1 653 766 - -
Pral4145g00055 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 277 400 - -
Pral4145g00055 1034 SUPERFAMILY Protein kinase-like (PK-like) 674 974 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00055 Pral-Chr4145 654142 665753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00055 103 276 Receptor kinase-like Gene Family AT1G56120 27.586 1.06e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4145g00055 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00055 - - qsa:O6P43_001204 1478.77