Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00054 ATGGCTGCTTCTTCTTCTTGGCCAGTGATGGCCTTAGCAATTGCTTCGGCTGTTTGTGTGTTCTTCAGCTGCTTGGTTACTGTATCCTCACAAGATCAGAACATTACTACCGATCCTTCTGAAGCGAGAACTTTGAATTCAATCTTCAACAAATGGGGAATATCGGCAGTACAAGATGCATGGAATATAAGTGGTGAAGTATGCAGCGGACAAGCCATTGACAGCGCTATCGATATCCAAGCCTTCAATCCATTTATCAAATGTGACTGTTCCAATGGCATTTGCCACATTACTGCACTGATGGTCTATGCATTGGATGTTGTTGGGGAAATCCCAAAAGACCTATGGACTCTGACTCACCTCACCTATTTGAAACTCGACCAGAATTACTTGACGGGTTCTCTACCTCTAGCCATTGGAAATCTCACTCGTATGCAATACCTGAGCTTCGGCACCAATGCCTTATCAGGGGAGCTTCCCAAGGAATTGGGAAATCTTACCGAGTTAATATTATTGGGTCTTGGATCCAACAACTTCTATGGTTCTATCCCATCTGAACTAGGGAAACTCGAGAAATTGGAGCAAATCTACATAGATAGTTCAGGACTCAGTGGCCAGATTCCTCCCACTTTTGCTAATCTTAAAAACCTGGTGACAGTATGGGCTTCAGACATGGAACTCACGGGCAGGATACCTGACTTTATAGGAAATTGGTCTAAGCTCACAACTCTGAGGTTTCAGGGTAATTCCTTTGAAGGCTCAATACCATCATCATTTAGCAATCTGACTTCTCTTTCAGAGTTGAGAATAAGCGAATTATCTAAACGGAGCTCCTCACTGGCATTTATAAGGAATATGACGTCTTTGAGTGTCTTAGTACTGAGAAATAACAATATTTCTGATTCCATTCCATCCAATATCGGTGTATTTGTAAAATTGACCCAGCTGGATCTGAGCTTCAATAACATCAGAGGACATATTCCAGGATCACTTTTCAATCTGAATTTATTAACACACTTGTTTCTTGGAAATAACAAACTCAGTGGTGCAATACCTAGTCTGAAAAGCCCAAATCTTCTCAATATAGACTTGTCCTACAACAATCTATTAGGGAATCTCCCCTATTGGGCAAACCAACCAAATTTACAACTAAATTTGGTTGCTAACAACTTGACAATAGAAGGTTCAAATAGCAGTGGCCTTCATTCTGGACTCAGATGTTTGCAGCAAAATTTTCCTTGTCATCGTGGTACTGGAATATATTATAACTTTGCAATCAAGTGTGGCGGTCCTCCAATTACGTTATCAAAAAGAATTTCTTATGAAAGAGATGATGCGGTGCTTGGTCCTGCAACTTATTTTGTAACTGATACAACAAGATGGGCCGTTAGCAATGTTGGGGTTTTTACTGGGATATACGAGGCTCCATACACAAGTTGGGTATCTAATCAGTTCATTGGTACTTTGAACTCAGAGCTCTACGAGACAGCACGGTTATCGGCTTCTTCATTAAGATATTATGGCCTAGGACTGGAAAATGGGGCTTATAACATTTCCCTTTATTTCGCTGAAACATCTATTCTTGATAGAACTGCTACATGGAAAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGAAAACATGTTTTGAAGGATTTTGACATAAAAAGGGAAGCTGGGAATGTCTCTTTCAGAGCTGTACGGAAAGATTTTAGGGTTAATGTGACAGAAAACTTCGTCGAGATCCATCTCTTTTGGGCAGGAAAAGGGACTTGCTGCATACCTGCTCAAGGGACTTATGGTCCTCTGATTTCAGCAATCAGCGCTACCCCAGATTTTATTCCCATAGTCAGTAACAAACTACCACACAGCACAAAGAATAGGAATGGTCTGATTGTGGGAGTTGTTGTTGGTGTTGGAGTCGTAAGCTTACTGTCTGCTCTAGTGGTTTTCTATATCATCCAGAGAATAAAGCGTCAAGGAAATGCTGCAGAAGAGCTTTTAGGTATTGATACAAAGCCATACACTTTCAGCTATTCTAAGTTAAAGAATGCTACAGGTGACTTCAATCCTGGAAACAAACTGGGAGAGGGAGGTTTCGGACCTGTTTATAAGGGAACAATTAATGATGGAACAATAATTGCTGTGAAACAACTATCCATAGCATCTCATCAAGGAGAGAGCCAGTTCATAGCTGAGATTGCAACTATATCTGCTGTGCAACATCGTAATCTTGTTAAATTATATGGATGTTGCCTTGAAGGAAAGAAAAGACTACTTGTCTATGAATATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTTAAATCTCAACTGGCCTGCGCGCTATGATATCTGCATAGGTGTAGCTAGAGGTTTAACTTATCTTCATGAAGAGTCTCGGCTCCGCATTGTGCATCGTGATGTAAAGGCCAGTAATATTCTGCTTGATCATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATATGATGATAAAATGACCCATATAAGTACTCGTGTGGCTGGGACAATTGGATATCTTGCTCCTGAGTATGCTATGCGTGGGCACCTTACTGAGAAAGTAGATGTGTTTTCCTTTGGCATTTTGGCCCTAGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTAGAAGGGGAGAAGATGTATCTCCTTGAATGGACTTGGCAGCTGCACGAGAAAAATTGTATACTTGGACTGTTGGATCCTAAACTATTAAAAGATTTCAACGAGGAAGAAGTAAAAAGGATCATAGGGATATCTCTTCTGTGCACTCAAGCATCGCCATCGTTAAGGCCGACGATGTCTCGTATCGTGGCAATGCTGTCTGGAGATATCGAAGTAAGCACTGTAACTACAAAGCCTGGATACTTGACAGACTGGAAATTTGATGATGTGAGCAGCTTCATCACTGGGTGGGCCACAAAGGGATCAGCATCAGGTACAAGTCAATATAACTCGTCCCCAAGTAAGAGCACAGTTAGCAGTGCAGCCAAATCGCCTGGAGATGCTTCTAAGCCCATTCTTAGTGGCATTTTTGGTGAAGGTGGATGA 3105 0.4119 MAASSSWPVMALAIASAVCVFFSCLVTVSSQDQNITTDPSEARTLNSIFNKWGISAVQDAWNISGEVCSGQAIDSAIDIQAFNPFIKCDCSNGICHITALMVYALDVVGEIPKDLWTLTHLTYLKLDQNYLTGSLPLAIGNLTRMQYLSFGTNALSGELPKELGNLTELILLGLGSNNFYGSIPSELGKLEKLEQIYIDSSGLSGQIPPTFANLKNLVTVWASDMELTGRIPDFIGNWSKLTTLRFQGNSFEGSIPSSFSNLTSLSELRISELSKRSSSLAFIRNMTSLSVLVLRNNNISDSIPSNIGVFVKLTQLDLSFNNIRGHIPGSLFNLNLLTHLFLGNNKLSGAIPSLKSPNLLNIDLSYNNLLGNLPYWANQPNLQLNLVANNLTIEGSNSSGLHSGLRCLQQNFPCHRGTGIYYNFAIKCGGPPITLSKRISYERDDAVLGPATYFVTDTTRWAVSNVGVFTGIYEAPYTSWVSNQFIGTLNSELYETARLSASSLRYYGLGLENGAYNISLYFAETSILDRTATWKSLGRRVFDIYIQGKHVLKDFDIKREAGNVSFRAVRKDFRVNVTENFVEIHLFWAGKGTCCIPAQGTYGPLISAISATPDFIPIVSNKLPHSTKNRNGLIVGVVVGVGVVSLLSALVVFYIIQRIKRQGNAAEELLGIDTKPYTFSYSKLKNATGDFNPGNKLGEGGFGPVYKGTINDGTIIAVKQLSIASHQGESQFIAEIATISAVQHRNLVKLYGCCLEGKKRLLVYEYLENKSLDQALFGNCLNLNWPARYDICIGVARGLTYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKMTHISTRVAGTIGYLAPEYAMRGHLTEKVDVFSFGILALEIVSGRPNSDSSLEGEKMYLLEWTWQLHEKNCILGLLDPKLLKDFNEEEVKRIIGISLLCTQASPSLRPTMSRIVAMLSGDIEVSTVTTKPGYLTDWKFDDVSSFITGWATKGSASGTSQYNSSPSKSTVSSAAKSPGDASKPILSGIFGEGG 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00054 1034 Gene3D - 422 613 - -
Pral4145g00054 1034 FunFam Os05g0263100 protein 42 275 - -
Pral4145g00054 1034 FunFam Leucine-rich repeat receptor-like protein kinase 421 613 - -
Pral4145g00054 1034 Gene3D Transferase(Phosphotransferase) domain 1 767 971 - -
Pral4145g00054 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 989 - -
Pral4145g00054 1034 Gene3D Ribonuclease Inhibitor 276 417 IPR032675 -
Pral4145g00054 1034 Gene3D Ribonuclease Inhibitor 38 275 IPR032675 -
Pral4145g00054 1034 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00054 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 767 971 - -
Pral4145g00054 1034 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Pral4145g00054 1034 CDD STKc_IRAK 697 959 - -
Pral4145g00054 1034 FunFam Leucine-rich repeat receptor-like protein kinase 661 766 - -
Pral4145g00054 1034 SUPERFAMILY Protein kinase-like (PK-like) 674 978 IPR011009 -
Pral4145g00054 1034 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Pral4145g00054 1034 MobiDBLite consensus disorder prediction 994 1017 - -
Pral4145g00054 1034 Pfam Protein tyrosine and serine/threonine kinase 694 959 IPR001245 GO:0004672|GO:0006468
Pral4145g00054 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 276 399 - -
Pral4145g00054 1034 Pfam Malectin domain 423 609 IPR021720 -
Pral4145g00054 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Pral4145g00054 1034 ProSiteProfiles Leucine-rich repeat profile. 312 334 IPR001611 GO:0005515
Pral4145g00054 1034 SUPERFAMILY L domain-like 92 397 - -
Pral4145g00054 1034 SMART serkin_6 691 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00054 1034 MobiDBLite consensus disorder prediction 994 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00054 Pral-Chr4145 561438 574464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00054 102 257 Receptor kinase-like Gene Family AT1G56120 28.205 3.54e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4145g00054 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00054 - - lang:109352863 1421.37