Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00051 ATGGCTCCTTCTCCTTCTCCTTCTTGTTCTTCTGTGTCGTCGTCTTCACCAGCCATGGCTTTTGCAGTTGCTTCTGCTGTTTGTGTGTTCTTCAGTTGCTTCGTTTCTGTATCACAAGCTCAAAACGCTACCACAGATCCTTCTGAAGCGAGAACGTTGAATTCAATCTTCAACAAATGGGAAATATCGGCGTCAGCAAGTGTATGGAATATAAGCGGTGAACTATGCAGCGGACGAGCTATTGACAGCACTACCGCGGTCGAAGACTTCAATCCATTTATCAAATGCGACTGTTCCAATGGCACCTGCCACATTACTGCACTGAGGGTTTATGCATTGGATGTTGTTGGGGAAATCCCAGAAGAGCTATGGACTCTGACTCACCTCACCAATTTGAACCTCGGTCAGAATTATTTGACGGGTTCTCTACCTCCGGCCATTGGAAATCTCACTCGTATGCAGTACATGACCTTAGGCATCAACTCCTTATCAGGGGAGCTTCCCAAGGAAATGGGAAATCTTACCGAGTTAATTGTATTGGGTCTTGGATCAAACAACTTCTCTGGGTCTATCCCCTCTGAACTAGGGAAACTCGTGAAATTGGAACAACTCTATTTAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCCACTTTTGCTAGTCTTAAAAACCTGGCGACAGTATGGGCTTCAGACATGGAACTCACGGGCAGGATACCAGACTTCATAGGAAGTTGGTCTAAGCTTATAGTCTTGAGGTTCCAGGGGAATTCTTTTGAAGGTCCAATACCATCATCATTTAGCAATCTGACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGCATTTATAAGGAATATGAAATCTTTGACTGTCTTAGTTCTGAGAAATAACAATATTTCTGATCCAATTCCATCAAATATCGGTGAATTTCTAAATTTGACCCAGCTGGATCTGAGCTTCAATAACATCACAGGACAGGTTCCGGGATCACTTTTCAATCTGAGTTTGCTAACACACTTGTTTCTGGGAAATAACAAACTCACTGGTGCAATCCCTACTCAGATAAGCCCAACTCTTCTCAATATAGACTTGTCCTACAACAATCTATCAGGGACCCTCCCCTCTTGGGTGAACAAACAAAATTTACAACTAAATTTGGTTGCTAACAATTTGACAATAGAAGGTTCAAATAGCAGTGACCTTCCTTTTGGACTCAATTGTCTACAGCGAAATTTTCCTTGTTTTCGTGGTTCTGGAATATATTATAACTTTGCAATCAAGTGTGGCGGTCCTTCAATCACATCATCAGAAAGAATTACTTATGAAAGAGATAATGAGACACTTGGTCCTGCAACTTATTATGTTACTGATACAACAAGATGGGCAGTTAGCAATGTCGGGCTATTTACTGGGACAAACAATCCTCAATACACAAGCTTTGTATCAAATCAGTTCACTGGTACTGTGGACTCAGAGCTCTTCCAAACAGCACGGCTATCAGCTTCTTCGTTAAGATATTATGGCTTGGGGTTGGAAAATGGGGATTATAACATTTCCCTTTATTTCGCCGAAACATCTATTCTAGATACGAGTACATGGAGAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGGAATCGTGTTTTGAAGGATTTTAACATTAAACGGGAAGCTGGGGGTGCCTCTTTTAAAGCTGTCCGAAAGGATTTTCAGGTTCATGTGTCAGAAAACTTTCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAGCTCAAGGTACTTATGGTCCTGTGATTTCAGCAATCAGTGCTACCCCAGATTTCATTCCCACAGTTGGTAACAAACCTCCAAGCAGTACAAAGAACAGAACCGGTTTGATTGTGGGCATTGTTGTTGGTGTTGGAGTCGTAAGCTTTCTTTTTGTTTTTGTGGTTTTCTGTATCATCCAGAGAAGAAAGCATCATGAAGATGGTGAAGAAGAGCTTTTAGGTATAGATATAAAGCCATATACTTTCAGCTATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCAAGCAACAAATTGGGAGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAACGATGGAAGAGTAATTGGTGTGAAACAACTTTCTGTAGGATCTCATCAAGGAAAGAGCCAATTCATAGCTGAGATTGCAACTATATCTGCTGTGCAACATCGTAATCTTGTTAAATTATATGGGTGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTTAACTCTCAACTGGCCCACACGCTATGATATTTGCATGGGTGTAGCTAAAGGTTTAGCTTACCTTCATGAAGAGTCTCGCCTCCGTATTGTGCACCGTGATGTAAAAGCTAGTAATATTCTACTTGATCATGATCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATATGACGATAAAAAGACCCATATAAGCACCCGTGTAGCTGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACGGAGAAAGCAGATGTGTTTTCCTTTGGTGTTTTGGCCTTAGAGATGGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTAGAAGGGGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTGCATGAGAACAACTGTATACTTGGACTCGTGGATCCTAGACTATCTAAAGATTTCAACGAGGGAGAAGTAAAAATGATTGTAGGGATATCTCTTCTGTGCACTCAATCATCACCATCGTTGAGGCCAGCGATGTCCCGTGTCGTGGCAATGCTTTCCGGAGATATCGAAGTGAGCAGTGTAACTTCAAAACCTGGATACTTGACAGACTGGAAATTTGATGATGTGAGCAGCTTCATGACTAGCGTGGCCACAAAGGGATTAGCATCAGGTACAAGTCAATATAACTCATCCACAAGTACTAGCACATTCAGTGGTGCAGATCTATCACCTAAAGATGCTTCTAAAACCGTCCTTCGTCACATTCTTGATGAAGGTAGATGA 3126 0.4171 MAPSPSPSCSSVSSSSPAMAFAVASAVCVFFSCFVSVSQAQNATTDPSEARTLNSIFNKWEISASASVWNISGELCSGRAIDSTTAVEDFNPFIKCDCSNGTCHITALRVYALDVVGEIPEELWTLTHLTNLNLGQNYLTGSLPPAIGNLTRMQYMTLGINSLSGELPKEMGNLTELIVLGLGSNNFSGSIPSELGKLVKLEQLYLDSSGLSGQIPPTFASLKNLATVWASDMELTGRIPDFIGSWSKLIVLRFQGNSFEGPIPSSFSNLTSLTELRISEISNGSSSLAFIRNMKSLTVLVLRNNNISDPIPSNIGEFLNLTQLDLSFNNITGQVPGSLFNLSLLTHLFLGNNKLTGAIPTQISPTLLNIDLSYNNLSGTLPSWVNKQNLQLNLVANNLTIEGSNSSDLPFGLNCLQRNFPCFRGSGIYYNFAIKCGGPSITSSERITYERDNETLGPATYYVTDTTRWAVSNVGLFTGTNNPQYTSFVSNQFTGTVDSELFQTARLSASSLRYYGLGLENGDYNISLYFAETSILDTSTWRSLGRRVFDIYIQGNRVLKDFNIKREAGGASFKAVRKDFQVHVSENFLEIHLFWAGKGTCCIPAQGTYGPVISAISATPDFIPTVGNKPPSSTKNRTGLIVGIVVGVGVVSFLFVFVVFCIIQRRKHHEDGEEELLGIDIKPYTFSYSELKNATDDFNPSNKLGEGGFGPVYKGTLNDGRVIGVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQALFGNCLTLNWPTRYDICMGVAKGLAYLHEESRLRIVHRDVKASNILLDHDLTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEMVSGRPNSDSSLEGEKMYLLEWAWQLHENNCILGLVDPRLSKDFNEGEVKMIVGISLLCTQSSPSLRPAMSRVVAMLSGDIEVSSVTSKPGYLTDWKFDDVSSFMTSVATKGLASGTSQYNSSTSTSTFSGADLSPKDASKTVLRHILDEGR 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00051 1041 FunFam Putative LRR receptor-like serine/threonine-protein kinase 284 407 - -
Pral4145g00051 1041 Gene3D Phosphorylase Kinase; domain 1 670 773 - -
Pral4145g00051 1041 Gene3D Ribonuclease Inhibitor 46 286 IPR032675 -
Pral4145g00051 1041 FunFam Leucine-rich repeat receptor-like protein kinase 429 620 - -
Pral4145g00051 1041 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Pral4145g00051 1041 ProSiteProfiles Protein kinase domain profile. 698 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00051 1041 SUPERFAMILY Protein kinase-like (PK-like) 681 985 IPR011009 -
Pral4145g00051 1041 CDD STKc_IRAK 704 966 - -
Pral4145g00051 1041 FunFam Leucine-rich repeat receptor-like protein kinase 667 773 - -
Pral4145g00051 1041 SUPERFAMILY L domain-like 94 403 - -
Pral4145g00051 1041 Pfam Protein tyrosine and serine/threonine kinase 701 965 IPR001245 GO:0004672|GO:0006468
Pral4145g00051 1041 SMART LRR_typ_2 342 370 IPR003591 -
Pral4145g00051 1041 SMART LRR_typ_2 174 198 IPR003591 -
Pral4145g00051 1041 SMART LRR_typ_2 126 150 IPR003591 -
Pral4145g00051 1041 SMART LRR_typ_2 294 318 IPR003591 -
Pral4145g00051 1041 Gene3D Ribonuclease Inhibitor 287 419 IPR032675 -
Pral4145g00051 1041 Pfam Leucine rich repeat 296 355 IPR001611 GO:0005515
Pral4145g00051 1041 FunFam Leucine-rich repeat transmembrane protein kinase 47 283 - -
Pral4145g00051 1041 Pfam Malectin domain 431 616 IPR021720 -
Pral4145g00051 1041 Gene3D - 430 620 - -
Pral4145g00051 1041 SMART serkin_6 698 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00051 1041 Gene3D Transferase(Phosphotransferase) domain 1 774 978 - -
Pral4145g00051 1041 FunFam Putative LRR receptor-like serine/threonine-protein kinase 774 978 - -
Pral4145g00051 1041 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 30 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00051 Pral-Chr4145 372128 386887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00051 110 283 Receptor kinase-like Gene Family AT1G56120 28.161 3.85e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4145g00051 PK_Tyr_Ser-Thr 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00051 - - lang:109352863 1514.21