Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00050 ATGCAGTACATGACCTTAGGCATCAACTCCTTATCAGGGGAGCTTCCCAAGGAAATGGGAAATCTTACCGAGTTAATTGTATTGGGTCTTGGATCAAACAACTTCTCTGGGTCTATCCCCTCTGAACTAGGGAAACTCGTGAAATTGGAACAACTCTATTTAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCCACTTTTGCTAGTCTTAAAAACCTGGCGACAGTATGGGCTTCAGACATGGAACTCACGGGCAGGATACCAGACTTCATAGGAAGTTGGTCTAAGCTTATAGTCTTGAGGTTCCAGGGGAATTCTTTTGAAGGTCCAATACCATCATCATTTAGCAATCTGACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGCATTTATAAGGAATATGAAATCTTTGACTGTCTTAGTTCTGAGAAATAACAATATTTCTGATCCAATTCCATCAAATATCGGTGAATTTCTAAATTTGACCCAGCTGGATCTGAGCTTCAATAACATCACAGGACAGGTTCCGGGATCACTTTTCAATCTGAGTTTGCTAACACACTTGTTTCTGGGAAATAACAAACTCACTGGTGCAATCCCTACTCAGATAAGCCCAACTCTTCTCAATATAGACTTGTCCTACAACAATCTATCAGGGACCCTCCCCTCTTGGGTGAACAAACAAAATTTACAACTAAATTTGGTTGCTAACAATTTGACAATAGAAGGTTCAAATAGCAGTGACCTTCCTTTTGGACTCAATTGTCTACAGCGAAATTTTCCTTGTTTTCGTGGTTCTGGAATATATTATAACTTTGCAATCAAGTGTGGCGGTCCTTCAATCACATCATCAGAAAGAATTACTTATGAAAGAGATAATGAGACACTTGGTCCTGCAACTTATTATGTTACTGATACAACAAGATGGGCAGTTAGCAATGTCGGGCTATTTACTGGGACAAACAATCCTCAATACACAAGCTTTGTATCAAATCAGTTCACTGGTACTGTGGACTCAGAGCTCTTCCAAACAGCACGGCTATCAGCTTCTTCGTTAAGATATTATGGCTTGGGGTTGGAAAATGGGGATTATAACATTTCCCTTTATTTCGCCGAAACATCTATTCTAGATACGAGTACATGGAGAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGGAATCGTGTTTTGAAGGATTTTAACATTAAACGGGAAGCTGGGGGTGCCTCTTTTAAAGCTGTCCGAAAGGATTTTCAGGTTCATGTGTCAGAAAACTTTCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAGCTCAAGGTACTTATGGTCCTGTGATTTCAGCAATCAGTGCTACCCCAGATTTCATTCCCACAGTTGGTAACAAACCTCCAAGCAGTACAAAGAACAGAACCGGTTTGATTGTGGGCATTGTTGTTGGTGTTGGAGTCGTAAGCTTTCTTTTTGTTTTTGTGGTTTTCTGTATCATCCAGAGAAGAAAGCATCATGAAGATGGTGAAGAAGAGCTTTTAGGTATAGATATAAAGCCATATACTTTCAGCTATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCAAGCAACAAATTGGGAGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAACGATGGAAGAGTAATTGGTGTGAAACAACTTTCTGTAGGATCTCATCAAGGAAAGAGCCAATTCATAGCTGAGATTGCAACTATATCTGCTGTGCAACATCGTAATCTTGTTAAATTATATGGGTGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTTAACTCTCAACTGGCCCACACGCTATGATATTTGCATGGGTGTAGCTAAAGGTTTAGCTTACCTTCATGAAGAGTCTCGCCTCCGTATTGTGCACCGTGATGTAAAAGCTAGTAATATTCTACTTGATCATGATCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATATGACGATAAAAAGACCCATATAAGCACCCGTGTAGCTGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACGGAGAAAGCAGATGTGTTTTCCTTTGGTGTTTTGGCCTTAGAGATGGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTAGAAGGGGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTGCATGAGAACAACTGTATACTTGGACTCGTGGATCCTAGACTATCTAAAGATTTCAACGAGGGAGAAGTAAAAATGATTGTAGGGATATCTCTTCTGTGCACTCAATCATCACCATCGTTGAGGCCAGCGATGTCCCGTGTCGTGGCAATGCTTTCCGGAGATATCGAAGTGAGCAGTGTAACTTCAAAACCTGGATACTTGACAGACTGGAAATTTGATGATGTGAGCAGCTTCATGACTAGCGTGGCCACAAAGGGATTAGCATCAGGTACAAGTCAATATAACTCATCCACAAGTACTAGCACATTCAGTGGTGCAGATCTATCACCTAAAGATGCTTCTAAAACCGTCCTTCGTCACATTCTTGATGAAGGTAGATGA 2670 0.409 MQYMTLGINSLSGELPKEMGNLTELIVLGLGSNNFSGSIPSELGKLVKLEQLYLDSSGLSGQIPPTFASLKNLATVWASDMELTGRIPDFIGSWSKLIVLRFQGNSFEGPIPSSFSNLTSLTELRISEISNGSSSLAFIRNMKSLTVLVLRNNNISDPIPSNIGEFLNLTQLDLSFNNITGQVPGSLFNLSLLTHLFLGNNKLTGAIPTQISPTLLNIDLSYNNLSGTLPSWVNKQNLQLNLVANNLTIEGSNSSDLPFGLNCLQRNFPCFRGSGIYYNFAIKCGGPSITSSERITYERDNETLGPATYYVTDTTRWAVSNVGLFTGTNNPQYTSFVSNQFTGTVDSELFQTARLSASSLRYYGLGLENGDYNISLYFAETSILDTSTWRSLGRRVFDIYIQGNRVLKDFNIKREAGGASFKAVRKDFQVHVSENFLEIHLFWAGKGTCCIPAQGTYGPVISAISATPDFIPTVGNKPPSSTKNRTGLIVGIVVGVGVVSFLFVFVVFCIIQRRKHHEDGEEELLGIDIKPYTFSYSELKNATDDFNPSNKLGEGGFGPVYKGTLNDGRVIGVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQALFGNCLTLNWPTRYDICMGVAKGLAYLHEESRLRIVHRDVKASNILLDHDLTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEMVSGRPNSDSSLEGEKMYLLEWAWQLHENNCILGLVDPRLSKDFNEGEVKMIVGISLLCTQSSPSLRPAMSRVVAMLSGDIEVSSVTSKPGYLTDWKFDDVSSFMTSVATKGLASGTSQYNSSTSTSTFSGADLSPKDASKTVLRHILDEGR 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00050 889 Gene3D - 278 468 - -
Pral4145g00050 889 Gene3D Phosphorylase Kinase; domain 1 518 621 - -
Pral4145g00050 889 Pfam Malectin domain 279 464 IPR021720 -
Pral4145g00050 889 SUPERFAMILY Protein kinase-like (PK-like) 529 833 IPR011009 -
Pral4145g00050 889 FunFam Leucine-rich repeat receptor-like protein kinase 515 621 - -
Pral4145g00050 889 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00050 889 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 40 131 - -
Pral4145g00050 889 FunFam Putative LRR receptor-like serine/threonine-protein kinase 622 826 - -
Pral4145g00050 889 Gene3D Transferase(Phosphotransferase) domain 1 622 826 - -
Pral4145g00050 889 FunFam Putative LRR receptor-like serine/threonine-protein kinase 132 255 - -
Pral4145g00050 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Pral4145g00050 889 Gene3D Ribonuclease Inhibitor 133 256 IPR032675 -
Pral4145g00050 889 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 847 - -
Pral4145g00050 889 FunFam Leucine-rich repeat receptor-like protein kinase 277 468 - -
Pral4145g00050 889 Pfam Protein tyrosine and serine/threonine kinase 549 813 IPR001245 GO:0004672|GO:0006468
Pral4145g00050 889 CDD STKc_IRAK 552 814 - -
Pral4145g00050 889 Gene3D Ribonuclease Inhibitor 1 132 IPR032675 -
Pral4145g00050 889 SMART serkin_6 546 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00050 889 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Pral4145g00050 889 SUPERFAMILY L domain-like 3 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00050 Pral-Chr4145 372128 440551 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00050 1 889 Receptor kinase-like Gene Family AT1G56120 62.822 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4145g00050 PK_Tyr_Ser-Thr 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00050 - - qsa:O6P43_001204 1339.32