Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00044 ATGTCTCTGTCGTCTCCTTCTCCTTCTTCTGCTTCACCGGTCTTGGTTTTTGCAATTGCTTCCGCTTTTTATGTGTGCTTGGCTGGGGTAGTACAAGCTCAAATCCCTCCTACAGATCCTTCCGAAGCGAAAGCTTTGAATTCAATCTTCAACAAATGGAATATATCGCCAGTAGAAACTGTATGGAATATAAGCGGCGAGATATGCAGCGGACAAGCCGTCAACAACGCTACCTCCATTGATGATTTCTTCAGTCCATTTATCAAATGCGACTGTTCCAGTGGCACCACTTGCCACATTTATGCACTGAGTCTTTATCAACAGGACGTTGTTGGCCAAATCCCACCAGAGCTGTGGACTTTCACTCACCTCACCTATTTGAACCTAAGCAGGAATTACTTGACGGGTTCTGTAGCTCCAGCCATCGGAAATCTAAGTCGGCTGCAGTCCTTGGGTTTGGGTGACAATGCTCTATCTGGGAAGCTTCCAAAGGAACTGGGAAGTCTTACTGAGTTAGTATCATTGAGTCTTGGAACAAACAACTTCTCAGGTCCTATCCCTTCCAAACTAGGCAATCTAGTGAAATTGAAAGAACTCCTCCTAGATAGTACGGGATTTAGTGGTCCGATTCCTTCAACTCTGGCTAATCTTAAAAACCTGGAAATGCTATGGGTTACAGACTTGGAGCACGCAGGAAGTATACCTGACTTCATAGGAAGTTTGTCTAACCTTACAGACTTGAGGCTCCAGTGTAATTCTTTCCAAGGCTCAATACCATCATCATTGGGCAATTTGACTTCTCTTAGGAAGCTATATTTGAAGAATAACAATATTTCTGATTCACTTCCCTCCAATATGGATGAATTATTTCCGATGTTGACCCACTTGGATTGGCGCTTCAACAATATCATGGGACAGATTCCAAATTCACTTTTTCGCATGCCTCAACTAGAAATATTGTGCCTAGGGAATAATGCTCTTAGTGGTACTATCCCTACCCATATAATCTTGCCTACTCTTAAAAACATTGGTCTTCCTTTTGGACACGAATGCCTGCAGAAAAATTTTCCCTGTTATCGTGGTCCTGGAAGGTATTCCAATTTTGCAATCAAGTGTGGTGGTCCTTCAATTACATTATCAGATGGAACTAAATATCAAGGTGAAGACGAGGAACTTGATCTTACTACTTCTGTTGTCACTGACTCAACATGGGCAGTTAGCAATGTGGGGTTCCCCCGTACTCTATCGGCCTCTAATTCTTTGCCTAGCCAGTTCACTGCTACTATAGACCCAGATCTCTTCCACACTGCCCGTGGGTCTACTGATTCATTAAGATATTATGGCCTGGGGCTGCAAAATGGGGATTACCAAGTCACCCTTGATTTTGTAGAAACATCTTTTCCCAATGATAAGACATGGAAAAGTCTAGGAAGACGAGTATTTGATATATATCTTCAGGGAAGCCATGTTTTGAAGGATTTTGACATAAGAAGGGAAGCAGGAGGGGCCTCATTTAGGCCTGTAAGAAAGGAATTTCAGGTTCAAGTGACAGAAAACTATATTGAGGTCCATCTTAATTGGGCTGCAAAGGGAACTCGCAACATACCAGAAGTTGATACTTGTGGTCCTCTGATATCAGCCATCAAAGCAACCAAAGATTTCAGACCTCCTAACAGAACCCACCTAACTGTGGGAATTATTGTTGCCACCGTAGCTGCTGTAAGCTTTTTGTCTATTCTTGTGGTTTTATATATTCGGAGAAGAAAGAATCATGGAGATGGCGATGATGATCTTTTAGGTATTGATACCAAGCTGTATACTTTCAACTATTCTGAGTTAAAAAATGCTACAAATGACTTCAATCCTAGCAAGAAGCTGGGAGAGGGAGGTTTTGGACCTGTATATAAGGGAACACTTAATGATGGAAGAGTAATTGCTGTGAAAAGACTATCTGTAAAATCTCATCAAGGAAACAATCAGTTCAAAGCAGAGATTGCTACTATATCAGCTGTGCAACATCGTAATCTTGTCACATTATATGGATGTTGTATTGAAGGAAATAAAAGACTACTTGTCTATCAGTATCTAGAAAATGGGAGTCTTGATAACGCCTTATTTAGAAATAATTTTACTCTCAACTGGCCCACTCGTTATGATATCTGCATTGGCGTAGCAAGAGGCTTAGCATACCTTCATGAAGAGTCCCGGCTCCGCATTGTGCATCGTGATATAAAGGCTAGTAATGTTCTGCTTGATCATGGCCTTCTCCCTAAAATATCAGATTTTGGTTTGGCTAAGTTGTATGATGATAAAATGACCCATATAAGCACTGGTGTAGCTGGGACAATTGGCTATCTTGCTCCGGAGTATGCCCTGCGTGGTCACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTTTGGCCTTAGAGATAGTTAGTGGGAGGCGAAATTCTGAGCCAAGTTTGGAAGAAGACAAGGTGTATCTTCTAGAATGGGTTTGGCAACTGCATGAAGAGAATCGTACAGTTGAAGTGGTAGATCTGAGACTATTATCAGATTTCAATGAGGAAGAAGTTAAGAGAATGGTAGGGATATCTCTTCTGTGCACGCAGGCATCACCATCGTTAAGGCCGGCAATGTCCCGTGTGGTGGCGATGCTTTCTGGAGATATAGAAGTGAGCACTGTAACTTCAAAGCCTGGATACCTGACGGACTGGAAATTTGATGATGTGAGCAGCTTCATGACTAGTCGAGTGGCAAAGCAATCAGAAGCAACTCAATACGACTTAGCAACAAGTGCTAGCAGTGTCAGCCGCCACCCAAACCAATCACCTGTTGATGCTTCTAAACCCATCCTTCAGTAA 2868 0.4233 MSLSSPSPSSASPVLVFAIASAFYVCLAGVVQAQIPPTDPSEAKALNSIFNKWNISPVETVWNISGEICSGQAVNNATSIDDFFSPFIKCDCSSGTTCHIYALSLYQQDVVGQIPPELWTFTHLTYLNLSRNYLTGSVAPAIGNLSRLQSLGLGDNALSGKLPKELGSLTELVSLSLGTNNFSGPIPSKLGNLVKLKELLLDSTGFSGPIPSTLANLKNLEMLWVTDLEHAGSIPDFIGSLSNLTDLRLQCNSFQGSIPSSLGNLTSLRKLYLKNNNISDSLPSNMDELFPMLTHLDWRFNNIMGQIPNSLFRMPQLEILCLGNNALSGTIPTHIILPTLKNIGLPFGHECLQKNFPCYRGPGRYSNFAIKCGGPSITLSDGTKYQGEDEELDLTTSVVTDSTWAVSNVGFPRTLSASNSLPSQFTATIDPDLFHTARGSTDSLRYYGLGLQNGDYQVTLDFVETSFPNDKTWKSLGRRVFDIYLQGSHVLKDFDIRREAGGASFRPVRKEFQVQVTENYIEVHLNWAAKGTRNIPEVDTCGPLISAIKATKDFRPPNRTHLTVGIIVATVAAVSFLSILVVLYIRRRKNHGDGDDDLLGIDTKLYTFNYSELKNATNDFNPSKKLGEGGFGPVYKGTLNDGRVIAVKRLSVKSHQGNNQFKAEIATISAVQHRNLVTLYGCCIEGNKRLLVYQYLENGSLDNALFRNNFTLNWPTRYDICIGVARGLAYLHEESRLRIVHRDIKASNVLLDHGLLPKISDFGLAKLYDDKMTHISTGVAGTIGYLAPEYALRGHLTEKADVFSFGVLALEIVSGRRNSEPSLEEDKVYLLEWVWQLHEENRTVEVVDLRLLSDFNEEEVKRMVGISLLCTQASPSLRPAMSRVVAMLSGDIEVSTVTSKPGYLTDWKFDDVSSFMTSRVAKQSEATQYDLATSASSVSRHPNQSPVDASKPILQ 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00044 955 FunFam Leucine-rich repeat receptor protein kinase EMS1 147 235 - -
Pral4145g00044 955 Gene3D Phosphorylase Kinase; domain 1 585 695 - -
Pral4145g00044 955 SMART LRR_typ_2 241 264 IPR003591 -
Pral4145g00044 955 SMART LRR_typ_2 314 338 IPR003591 -
Pral4145g00044 955 SMART LRR_typ_2 265 289 IPR003591 -
Pral4145g00044 955 SMART LRR_typ_2 145 169 IPR003591 -
Pral4145g00044 955 FunFam Leucine-rich repeat receptor-like protein kinase 589 695 - -
Pral4145g00044 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 27 921 - -
Pral4145g00044 955 FunFam Leucine-rich repeat receptor protein kinase EMS1 236 334 - -
Pral4145g00044 955 Gene3D Transferase(Phosphotransferase) domain 1 696 900 - -
Pral4145g00044 955 SUPERFAMILY L domain-like 94 344 - -
Pral4145g00044 955 ProSiteProfiles Protein kinase domain profile. 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00044 955 Gene3D Ribonuclease Inhibitor 39 227 IPR032675 -
Pral4145g00044 955 Gene3D Ribonuclease Inhibitor 228 361 IPR032675 -
Pral4145g00044 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Pral4145g00044 955 SMART serkin_6 620 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00044 955 Pfam Malectin domain 367 548 IPR021720 -
Pral4145g00044 955 FunFam Putative LRR receptor-like serine/threonine-protein kinase 696 900 - -
Pral4145g00044 955 Pfam Protein tyrosine and serine/threonine kinase 623 887 IPR001245 GO:0004672|GO:0006468
Pral4145g00044 955 CDD STKc_IRAK 626 888 - -
Pral4145g00044 955 MobiDBLite consensus disorder prediction 931 955 - -
Pral4145g00044 955 Gene3D - 366 553 - -
Pral4145g00044 955 SUPERFAMILY Protein kinase-like (PK-like) 603 912 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00044 Pral-Chr4145 328954 345194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00044 148 954 Receptor kinase-like Gene Family AT1G56120 50.736 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4145g00044 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00044 - - qsa:O6P43_001204 1116.68