Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00028 AATCTCTTCCGATGTGATACTGTATCAGTTATATTCCAAAAGGCAGCGTCAGGAGTGGGAATAGATCCCAGTTCTGAAAATGATTACATTGAAACAGGTTCCAAGGTGGAGCTGCCTTTCTGGCTTGCTCATGAGCTACAATTGAGACAAGTAGTATCGATCAACATTCCCTCTTGTTTTGATCAAAAAACTAGACTGGAGATTCAGGCTGATTGTGCCAGTGTGGATCTGAGGTCTCGGTGTCCATTCTTTTATGAATTTGGATGCAAGATAGCACCCGTGGTTGGCGATAGGACAATTGGATTTCTGCTCTTGTCTGCATTTAAGAATAGGTACAAGGAACTACTCACCAAGGCGCATACTGCAGCATTTTCAGCGGCTACCAAAATCTGGTCAATCCTAACAAACGAAGAGATCAATTTGTATGAGGCAGCTCAATCCTCCATGGCATCCTTTAAGAAGTGGCGAATTGGGGGACCTAGATTTCAGAAAGCCCCTGTTCTTGGAAGAAAGAGAAAATCAACTGAATAA 531 0.4294 NLFRCDTVSVIFQKAASGVGIDPSSENDYIETGSKVELPFWLAHELQLRQVVSINIPSCFDQKTRLEIQADCASVDLRSRCPFFYEFGCKIAPVVGDRTIGFLLLSAFKNRYKELLTKAHTAAFSAATKIWSILTNEEINLYEAAQSSMASFKKWRIGGPRFQKAPVLGRKRKSTE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00028 176 Pfam GINS complex protein 36 126 IPR021151 -
Pral4145g00028 176 CDD GINS_B_Psf3 8 57 - -
Pral4145g00028 176 Gene3D - 2 157 IPR038437 -
Pral4145g00028 176 SUPERFAMILY GINS helical bundle-like 56 157 IPR036224 -
Pral4145g00028 176 CDD GINS_A_psf3 52 158 - -
Pral4145g00028 176 SUPERFAMILY PriA/YqbF domain 6 57 - -
Pral4145g00028 176 PANTHER UNCHARACTERIZED 6 175 IPR010492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00028 Pral-Chr4145 161715 185743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00028 8 175 Core DNA Replication Machinery Family AT3G55490 69.643 2.16e-86 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00028 K10734 - qsa:O6P43_020202 284.263