Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00021 ATGCCTAATTCTAGCCTCGATTTTCACCTCTTCAATATGGAGAAGCGTTCCCAGCTGGAATGGAAGCTGCGATTGAGCATCATTAACGGAATTGCAAAAGGACTTTTATATCTCCATGAAGACTCTAGACTAAGGGTTATTCATAGGGATCTAAAAGCTAGTAATATACCATTAAACCATGAAATGAATCCAAAAATTTCTGATTTTGGATTAGCAAGAGCTTTTGGAGGCGACCAAAGGCAAGCAAATACTATTAGAGTTGTGGGTACCTATGGTTATATGGCTCCAGAATATGCTATGGAAGGCTTGTTTTCAATAAAATCAGATGTTTTCAGCTTTGGTGTTCTCCTACTAGAAATCATTAGTGGAAAAAAGAATGGTGGATTCTATCTTTCACAGCACCGTCAAAGCCTTCTCACATATGCATGGAGGCTTTGGTGTGAAGGGAAGGGCTTAGATCTAATGGATGCAATATTAGAAAGGTCATTTGAACCTTCTGAAGTTCTCAAGTGCATTCACATCGGCCTCTTATGTGTGCAAGAAGATGCAGCGGACAGACCAACAATGTCAAGTGTAGTACTTATGCTTGCAAGTGACTCAGTGAACCTTCTAAGGCCAACACAACCTGCATTTTCTGTTGGAAGAGGTTTCACGAAGAAAGAGCCTTCATCAAAAAATACCAGCCGTGACTCTGTCCATGGAGTAACTATATCTGAAGTTTTAGCTAGATGA 732 0.4016 MPNSSLDFHLFNMEKRSQLEWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNIPLNHEMNPKISDFGLARAFGGDQRQANTIRVVGTYGYMAPEYAMEGLFSIKSDVFSFGVLLLEIISGKKNGGFYLSQHRQSLLTYAWRLWCEGKGLDLMDAILERSFEPSEVLKCIHIGLLCVQEDAADRPTMSSVVLMLASDSVNLLRPTQPAFSVGRGFTKKEPSSKNTSRDSVHGVTISEVLAR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00021 243 Gene3D Transferase(Phosphotransferase) domain 1 1 205 - -
Pral4145g00021 243 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00021 243 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 231 - -
Pral4145g00021 243 FunFam Liguleless narrow1 1 204 - -
Pral4145g00021 243 Pfam Protein tyrosine and serine/threonine kinase 14 194 IPR001245 GO:0004672|GO:0006468
Pral4145g00021 243 SUPERFAMILY Protein kinase-like (PK-like) 1 211 IPR011009 -
Pral4145g00021 243 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00021 Pral-Chr4145 116567 129149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00021 1 213 Receptor kinase-like Gene Family AT4G23230 61.033 2.07e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4145g00021 PK_Tyr_Ser-Thr 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00021 - - gmx:100798691 375.555