Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4145g00004 ATGGGTTTAGAGAGGAACTTCGTCATCCAAAAGGGGTTTTACTTGATGATGGTGATTTGTGTTGGTGTTGTCCAAGTAAGTTCGATTAATGAGGAAGGTTCGATTCTTTTGGAGTTTAAAAAATTTCTTTCTGACCCACAAAACAGTCTTCACGATTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGCATTGCGATGATTCAATGGTAACTTCCATAAATCTTCATCAACTTAATCTATCTGGCTCTTTATCTCCAATCATCTGCAACCTTCCTCATCTGGTTGAGTTGAATTTGTCAAAGAATTTCATTTCTGGCCCTATTCCTGTTGATTTTGTTGATTGTAGTAGTCTAGAAATATTAGACCTTTGTACAAACAAATTTCATGGTGAACTTCAGAACCCTTTGTCCCAGATTACCTCACTAAGAAAGCTTTATCTTTGTGAGACTTCTATGTACGGTGAAGTGCCAGAAGAGATTGGGAATTTGAATTCCCTTGAAGAGCTAGTCATTTATAGCAATAATTTAACTGGAAGAATTCCCAAGTCAATAAGTCGATTGAAGCAACTAAAAATTATCAAGGCAGGCTTCAATAGTCTCTCTGGTCCAATACCTGTAGAAGTTAGTGAGTGTGAGAGCTTGGAGTTGTTAGGATTGGCACAGAATCAGCTAGAAGGTTCAATCCCAAGGGAGCTTCAGAGGCTTCAGAATCTGACTGCTATACTTTTGTACCAAAACCATTTATCTGGGGAGATCCCCCCAGAAATTGGAAATATCAGTAGGTTGGAATTACTTGCTTTGCATCAAAATTTGTTCAGTGGAGCTATTCCAAAAGAGCTGGGGAAGCTATCTCAGTTACAATTGTTGTATCTATACACCAACCACCTGAATGGGACGATTCCTCCGGAGCTAGGGAACCTTACAAGTGCTATGGAGATAGATCTTTCTGAGAACCTGTTGAGTGGTATTATTCCTAGAGAGTTGGGGCAGATCTCTAATCTTGGACTACTTCATCTATTTGAAAACCTTCTGGAGGGAGAAATCCCCAGGGAACTCGGGCAGTTATGGCAACTCAAAACTCTAGATTTGTCGATAAATAACTTAACAGGTACAATTCCATTAGTGTTCCAGAATCTTACATACATGGAGGATTTGCAGCTCTTTGACAATAAACTTGAGGGTAAGATTCCTCCTGAACTTGGAGCTAGAAGCAACCTCAGTGTTCTTGATTTATCTGCTAACAATCTTGTCCGTATGATACCTGCCCATCTTTGCAAATATCAAAAACTGAAATTTCTAAGCCTTGGGTCAAATAGGTTGTCTGGAAATATTCCATATGATCTGAAAACTTGCAAGTCACTTGTGCAGCTTATGCTGGGGAGCAACCGACTAACAGGATGCCTCCCTGTTGAATTAAATGAACTTCATAATCTTTCTGCACTTGAACTTCATCAGAATCGGTTCTCTGGGCTAATAAACCCAGGGATAGGTCAGCTCCAGAGTTTGATAAGGCTTCTCCTGTCAGATAATCATTTTTTTGGGCATCTACCTCCCGAGATTGGAAAATTAGCACAACTTGTCTCATTCAATGTTTCCTCTAATCTTCTAAGTGGAAGTATCCCTAATGAGCTGGGAAACTGTGTAAAACTACAGAGGCTTGATCTTAGCAGGAATCAGTTAACTGGAGCCCTTCCAGATGAAATTGGCAAGCTGGTGAATTTGGAATTGTTGAAACTTTCTGATAATAAATTTTCAGGTGCAATACCCAGCACTTTAGGGGATCTTACTCGTCTCACGGAGCTGGAGCTTGGTGGCAACTTGTTTTCAGGTAGCATTCCTTTACATCTGGGAGGACTTACTGCTCTTCAGATTGCCCTTAATATGAGCCATAATAAACTATCTGGTGTAATTCCTAACAGCTTGGGGAACTTACAGATGTTGGAATTCCTTTATTTAAATGACAATGAGCTTGTTGGTGAAATTCCCACCTCAATAGGTGACTTGCCCAGTCTTTTGGTTTGCAATGTTTCTAACAATAACTTGACTGGAACTATTCCAAACACTCCTGCATTTCAAAGGATGGATTTCACAAATTTTGCTGGAAACAACGGATTGTGCCTAGTAGGTTCCTATTATTGTCATTCATCCGAATCTCCACCTGCTACTCCAAAACAAAGTTGGACTAGAGATGGTTCTTCCAGGGAGAAGATAGTGAGTATAGTTTCAAGTGTAGTTGGATTGGTTTCTCTTACATTCATAGTCTGTATGTGTTGGGCTATGAAGCGCAATAGCCCTACTTTTGTCTCCTCAGAAAGGCAAAGAATGCCTCATATCCTAAATAACTATTATTTTCCGAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTAATAATTTTTCTGAAGCTGCAATTATAGGAAATGGAGCATGCGGCACTGTGTACAAGGCTATGATGGCCGATGGTGAAGCGATTGCTGTCAAAAAGCTGAATTCTTGTGGAGAAAGAGCTAATGTTGACAAAAGCTTTCTTGCGGAGATTTCAACCCTTGGAAAGATCAGGCACCGGAATATTGTGAAGTTATATGGATTTTGTTATCACGGGGATTCTAAGATTCTCTTATATGAGTACATGGAAAATGGCAGCCTCGGAGAACAACTCCATGCAAGCCCAGAATCATGTCCACTGGATTGGAATTGTCGATATAAGATTGCCCTTGGGGCTGCAGAAGGCTTGTGCTATCTTCATTGTGACTGCAAACCTCAAATCATCCACCGTGATATAAAGTCAAACAACATACTACTTGATGAAAATTTTCAGGCACGCGTTGGAGACTTTGGATTGGCAAAGTTGATTGACTTTTCGTTTTCAAAATCCATGTCTGCTGTAGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACTATGAAGGTGACTGAGAAATGTGACGTCTATAGCCTTGGGGTAGTTTTGTTGGAACTAGTCACCGGCCGTTCACCAGTTCAACCGCTGGAACAGGGTGGTGATTTGGTGACTTGGGTGAGAAGAGCAATTCAAGCAGCAGTACCGACATTGGAACTATTTGACAAGCGACTGGATCTGAGTGAACAGAGAACAAATGAAGAGATGTCTCTTATTCTCAAAATTGCAATGTTCTGCACCAGTGTGTCTCCTCTTAATAGGCCAACAATGAAAGAGGTCATTGCAATGTTGATCGATGCTAGAGAGTGTGTCAGCAATTCTCCTTCTATTCCTACATCTGAACACCCACATGATGATGAATCATCTTTCAAAGGTTAA 3318 0.4063 MGLERNFVIQKGFYLMMVICVGVVQVSSINEEGSILLEFKKFLSDPQNSLHDWNSSDLTPCNWTGVHCDDSMVTSINLHQLNLSGSLSPIICNLPHLVELNLSKNFISGPIPVDFVDCSSLEILDLCTNKFHGELQNPLSQITSLRKLYLCETSMYGEVPEEIGNLNSLEELVIYSNNLTGRIPKSISRLKQLKIIKAGFNSLSGPIPVEVSECESLELLGLAQNQLEGSIPRELQRLQNLTAILLYQNHLSGEIPPEIGNISRLELLALHQNLFSGAIPKELGKLSQLQLLYLYTNHLNGTIPPELGNLTSAMEIDLSENLLSGIIPRELGQISNLGLLHLFENLLEGEIPRELGQLWQLKTLDLSINNLTGTIPLVFQNLTYMEDLQLFDNKLEGKIPPELGARSNLSVLDLSANNLVRMIPAHLCKYQKLKFLSLGSNRLSGNIPYDLKTCKSLVQLMLGSNRLTGCLPVELNELHNLSALELHQNRFSGLINPGIGQLQSLIRLLLSDNHFFGHLPPEIGKLAQLVSFNVSSNLLSGSIPNELGNCVKLQRLDLSRNQLTGALPDEIGKLVNLELLKLSDNKFSGAIPSTLGDLTRLTELELGGNLFSGSIPLHLGGLTALQIALNMSHNKLSGVIPNSLGNLQMLEFLYLNDNELVGEIPTSIGDLPSLLVCNVSNNNLTGTIPNTPAFQRMDFTNFAGNNGLCLVGSYYCHSSESPPATPKQSWTRDGSSREKIVSIVSSVVGLVSLTFIVCMCWAMKRNSPTFVSSERQRMPHILNNYYFPKEGFTYQDLLEATNNFSEAAIIGNGACGTVYKAMMADGEAIAVKKLNSCGERANVDKSFLAEISTLGKIRHRNIVKLYGFCYHGDSKILLYEYMENGSLGEQLHASPESCPLDWNCRYKIALGAAEGLCYLHCDCKPQIIHRDIKSNNILLDENFQARVGDFGLAKLIDFSFSKSMSAVAGSYGYIAPEYAYTMKVTEKCDVYSLGVVLLELVTGRSPVQPLEQGGDLVTWVRRAIQAAVPTLELFDKRLDLSEQRTNEEMSLILKIAMFCTSVSPLNRPTMKEVIAMLIDARECVSNSPSIPTSEHPHDDESSFKG 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4145g00004 1105 Gene3D Ribonuclease Inhibitor 380 722 IPR032675 -
Pral4145g00004 1105 Gene3D Phosphorylase Kinase; domain 1 768 881 - -
Pral4145g00004 1105 ProSiteProfiles Protein kinase domain profile. 804 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00004 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Pral4145g00004 1105 Gene3D Transferase(Phosphotransferase) domain 1 882 1091 - -
Pral4145g00004 1105 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00004 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Pral4145g00004 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 881 - -
Pral4145g00004 1105 Pfam Leucine Rich Repeat 552 574 IPR001611 GO:0005515
Pral4145g00004 1105 SMART LRR_typ_2 358 381 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 574 598 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 478 502 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 166 190 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 647 671 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 286 310 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 238 262 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 526 550 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 94 118 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 551 573 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 407 430 IPR003591 -
Pral4145g00004 1105 SMART LRR_typ_2 622 646 IPR003591 -
Pral4145g00004 1105 FunFam Leucine-rich receptor-like protein kinase family protein 281 377 - -
Pral4145g00004 1105 SUPERFAMILY L domain-like 31 312 - -
Pral4145g00004 1105 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pral4145g00004 1105 Gene3D Ribonuclease Inhibitor 280 379 IPR032675 -
Pral4145g00004 1105 MobiDBLite consensus disorder prediction 1086 1105 - -
Pral4145g00004 1105 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 330 1078 - -
Pral4145g00004 1105 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 184 - -
Pral4145g00004 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 882 1094 - -
Pral4145g00004 1105 FunFam Predicted protein 185 280 - -
Pral4145g00004 1105 SMART serkin_6 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4145g00004 1105 Gene3D Ribonuclease Inhibitor 184 279 IPR032675 -
Pral4145g00004 1105 SUPERFAMILY Protein kinase-like (PK-like) 785 1077 IPR011009 -
Pral4145g00004 1105 SUPERFAMILY RNI-like 375 690 - -
Pral4145g00004 1105 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4145g00004 Pral-Chr4145 41084 44584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4145g00004 23 1087 Receptor kinase-like Gene Family AT1G73080 38.117 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4145g00004 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4145g00004 - - gmx:100818311 1622.45