Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4143g00030 ATGACTCAGAACACTGATATGAGACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGAGTTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGTGGGGAGTAACCATTATTCTATGGATGAAGGTGATATATCTTCTATTAGGAGCAGGGCTCATGAAAGCATTCAGCATGCTGACGTGCTCAGTGTCAATTCCAGTCATGATTCTCTATCTGAAAATGCAGATAGTAAACTGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCCAGTGAGGTTAATTTAGCAAATGGTAGCCATTCCAAGAATGCAGACAGGAGAAATGTATCTTGTAGTTCGGCTTCAGTTAATATCTTAGGGGCAGAAGGATCTGGGAGTGCACAATCTTTTGACATGTGTGGCTTACCTGAGATTCCTCCTTCAAAAGATGTTGATACCATTGAGAGCTCGCCTCAGGTACAAGGCAATGATTCAAAGTCTCAATGTGTCAAGTCTCATTCAACTATTCCCAGATTAATGGACGTGGAAAGAGATGCACGTTCTCTTATTCCAGAAAAACCTGAATGCTTCACAGAAAATACTGATTCACCATTGAGAACAGTGATAGCAAATTCGGTTGTTTCTGGTGAGAAACCTCTTGTTGATGGTAGCTCCTCAGCTTCATTAAAAATAGATTCCAAGTCAGAAGCTGATGCTGTCAATGGAGGCATTCCAGGTGAAGCTCGTAATGATGAAGTCCAAGATGAGCAGGATAAAGCTGAGAAACCACTTGAATCACTTGGCATGGAGGATCCTCGATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGAGAAGACCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAACACACTTATTGCATGCGAGAAATGCTTAAGAAGGTCCCTGAAGGAGACTGGCAATGTGAAGAATGCAAATTTGCAGAGACATATAATCAGAGGCTAGGTTCAGATGTTGAAGAAAGAAAAATTTCAAAAGTTAGTTCAACATCACAACATTCTGGCAAGAGGCTGACTGAGAATATAGAACCGACTCCTCTAACAAAAAGGCAGGCTCTTGAATCAAGCTCAGGTTCACCGAAGTCATCAAGCCCCAAGAGAATAGTTGCACTTTCTCAAGAATCTTCATTAAAGAGCTTAGATAAAGGTAAAGTGAAGACTGATAATCAGATGCCTATTCGAAATCACTCTGGCAGTGATAACACGGAAACAGCTTGTTCTCCTTCTGCTGGCCCTCGGGGTCTACTTCGAAAGGGTATGCTGTTGAAATCTAATTCATTCAACGTGTTAAATTCAAAGCCTCGAGTCAAACCTGTTGATGATGTTGTTCCCCAAAAGCTGAAAGGGCCTGGTGAAAATACTTCTAAGAATATGGAGACACCTGCCCGGATGATAGGAAAATCTGTGTCATTTAAATCCATGCATTTGGGTCGTTCAAGTACAACTGCATCAAAAGTTAAATTGCTTTCATCAAAATCTGTACCCGCTCAAGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCCTTTGACAAGAAAAGTCTTTCTAGGGTTGATCGACCAGTGGTTTGCTCAACAACGGCTACCTCTGTTGTTTCAACACCCAAAGGTGACCAGAAGAACTCAACTATTAGTGAAACTATTAAATCTTCATCAGTTAGCAACAACCGAGACTTGAAGGTGAATCAAGATGGAAAATTAAGTACCTTATCAAAGTCTATTAGTAATGTAGGCCGTAAAGGTGTAGAACCTCAAGTCTGTTCAGGGAGGATATATACCAGTGGTGATGAATCTGTACAAGATGTGCAGCCTCGATTACGAGAAACAGCTAATCCAGTTGAGAAATCCAGAGACACCTCTAGTGACTGTGTGAAGACAGATGCCATTGCTACTTCCAAAGGATGCTGTCAAAAGTGTAAGGAGTCTGGTCATACTACAGAATGTTGCACAATTGGTAAAATCCAAGAATCTGGTAATGAAGTTTCTGTTGCTACCACAAGTAGTTATATAGAGGAAATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGAATGCCAGAAATATACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCGCAGACTTGAAATGTGAAGCCACAACTCAAGACCAAGTATTGGTTTCTTGCACACCAAAGTATAGCACATCTGGTGAAGAAATTCACGATGGGCAGGACACTATTGAGAGCTCTGCAGCTGCATCTTTGAAATGCATATCTGATGAAAAGCAGCTTAACTTAAACCAAAATGATTCTTGTTCTCAATTAGGAAACCCAGGTGTTGTTGGCTCTTCCATTGGAAAGAATGCTGTGAGAGACTTTCCTAGTCAACCTTTGGCGATCTCATGTGTTCTATCAAAGATGGCTGTTCCAGAATATGAATGCATCTGGAAGGGTATCTTTGAGCTGCATAGGAGCAGAAAGCCTCCTGACTTGTGTCCTGGACTTCAAGCGCATTTGTCCGCTTTTGCTTCCACAAAGGTTCTTGAAGTGGTGAACAAATTACCATCCAAAATTTCTCTCTGTGAAGTTCCTCGCTTGAGCACATGGCCTTCACAGTTTCATCAAGGTGGTGCTAAAGAAAATAATATCGCACTTTACTTCTTTGCCCAAGATGTTGAAAGTCATGAGAAACACTATGGCGTTCTTTTGGATCACATGATGAGGAATGACTTGGCACTTAAAGGAATCTTTGATGGTGTTGAACTGCTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGAAGAAGGATAAATCATTCAGATTCTGCGGAAAAGACTTGTATTCCTGCCTCGAGTATGATGCCAGTGAAAAAGGATTTTCCCACTGCCATTATGACTTTGTCTGAGGTCCACTGCTCACCAAAGCGAATGGATGAACAGTCAATTGCTGCGGATATGGCATGTATGGTTCTACCATCTAGTTCCCTAGACCAGAATCGCGCTCCAGTTGGTAGGGATGTTGATGTAAAAGAATCTAATATTGACCAGACACACTCAGGCTCACAAGTAAACTTAGAGGAGCAAGATGGTAAAATTGACACCAAACCTACATCAAGCAGTCTGGCTAGTGGTACACATTTCAGTCAAGAGTTGAAATCTACTGGCTCATATATGAAAGGTAGCCCACTGGAATGTGGACCAGAAAAGGAGTCTGAATCTTCTCCTGAAGCAATGGGAGCAAATGTTACGAATATGATTATGGAAACTGAAGTTGATCCGGGTATATCCGTTAACGAAGAGAAGTCTTTGCCTTCAGGGATTCCTTCTCTTGGCTCTCAAGAGATATGTGTTGCAACCACTGCCAGTGAGGACAGATTTTCTGAGAGAATGGCAGGTGATAGCAACCAACAAAGGCGTAAAAAGCAACAAAAAGATGATCAGTATATTGACTTTGAGACTCTTCAGGCAGAGCCAACTGTAGAAGGGGTGAAGCTTCAGCAGCCTAATGATGAAAGGTTTCGGCACATTGATCTAATGGACACTGCTATGCAGACTTCTGCAGTTACTTGCAAGAGACTTTGGAGCGAGGCAGACGTCAAATTGGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACAGATGATTGTGGAGCTTATGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATGGGAACAGTTTTGCGTCACATGCAAATGATCTTGGTACCGGCTCTTCAATTAAGGACAAAGGATGTGATGAAATCTGTGATGAGAAAATCATCCTGGAAGACTCGGGAACAATGGAAAGAACTTTCTTTCCAGTTGATGCGCATGACGTTAATGATTCTCATTTGGGTCCAAATAGCTCGTCGTTGAAAGGGCCTCATGTGTATGACGATCAATTTCATGACGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCAACACATAAAGGAATGCTGCCTTTCCTTGCTGGGGAAATAGAGAAGAAGCATTGTCAGGAAAAGCCTCCAGATTGCTTGGCAGATGAGCAAGAGGATGATGGTGTTGCGGCATCTCTCTCTCTTTCATTATCATTTCCATCGGTTAACAAAGAACGCGTTAAAACTGTTACAAAAGCAGAGCAGCTTTTGCCTGATGGGCGCCATGTGAATACCTCGTTGCTCCTTTTTGGGAAATTTGCGCACAAATAA 4392 0.4176 MTQNTDMRRESGTCNVCSAPCSSCMHFNRVCMGSKVEFSDENCRLVGSNHYSMDEGDISSIRSRAHESIQHADVLSVNSSHDSLSENADSKLTLSSKCQESKYLEGLDDNTSCISRASEVNLANGSHSKNADRRNVSCSSASVNILGAEGSGSAQSFDMCGLPEIPPSKDVDTIESSPQVQGNDSKSQCVKSHSTIPRLMDVERDARSLIPEKPECFTENTDSPLRTVIANSVVSGEKPLVDGSSSASLKIDSKSEADAVNGGIPGEARNDEVQDEQDKAEKPLESLGMEDPRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLKKVPEGDWQCEECKFAETYNQRLGSDVEERKISKVSSTSQHSGKRLTENIEPTPLTKRQALESSSGSPKSSSPKRIVALSQESSLKSLDKGKVKTDNQMPIRNHSGSDNTETACSPSAGPRGLLRKGMLLKSNSFNVLNSKPRVKPVDDVVPQKLKGPGENTSKNMETPARMIGKSVSFKSMHLGRSSTTASKVKLLSSKSVPAQDLKGTRLAKDSSAFDKKSLSRVDRPVVCSTTATSVVSTPKGDQKNSTISETIKSSSVSNNRDLKVNQDGKLSTLSKSISNVGRKGVEPQVCSGRIYTSGDESVQDVQPRLRETANPVEKSRDTSSDCVKTDAIATSKGCCQKCKESGHTTECCTIGKIQESGNEVSVATTSSYIEEMHKSDNVKAALQAALLRMPEIYKKKEVANQMDELGADLKCEATTQDQVLVSCTPKYSTSGEEIHDGQDTIESSAAASLKCISDEKQLNLNQNDSCSQLGNPGVVGSSIGKNAVRDFPSQPLAISCVLSKMAVPEYECIWKGIFELHRSRKPPDLCPGLQAHLSAFASTKVLEVVNKLPSKISLCEVPRLSTWPSQFHQGGAKENNIALYFFAQDVESHEKHYGVLLDHMMRNDLALKGIFDGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRINHSDSAEKTCIPASSMMPVKKDFPTAIMTLSEVHCSPKRMDEQSIAADMACMVLPSSSLDQNRAPVGRDVDVKESNIDQTHSGSQVNLEEQDGKIDTKPTSSSLASGTHFSQELKSTGSYMKGSPLECGPEKESESSPEAMGANVTNMIMETEVDPGISVNEEKSLPSGIPSLGSQEICVATTASEDRFSERMAGDSNQQRRKKQQKDDQYIDFETLQAEPTVEGVKLQQPNDERFRHIDLMDTAMQTSAVTCKRLWSEADVKLEDGENSSKKLKTDDCGAYGCSSSGGRDSYGNSFASHANDLGTGSSIKDKGCDEICDEKIILEDSGTMERTFFPVDAHDVNDSHLGPNSSSLKGPHVYDDQFHDEIPNLELALGGEMKPTHKGMLPFLAGEIEKKHCQEKPPDCLADEQEDDGVAASLSLSLSFPSVNKERVKTVTKAEQLLPDGRHVNTSLLLFGKFAHK 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 1187 1208 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 584 605 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 1096 1118 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 238 252 - -
Pral4143g00030 1463 SUPERFAMILY FYVE/PHD zinc finger 297 359 IPR011011 -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 1073 1137 - -
Pral4143g00030 1463 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 369 IPR013083 -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 370 459 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 379 429 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 269 291 - -
Pral4143g00030 1463 PANTHER - 308 1040 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 441 459 - -
Pral4143g00030 1463 SMART PHD_3 310 357 IPR001965 -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 237 304 - -
Pral4143g00030 1463 MobiDBLite consensus disorder prediction 1188 1208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4143g00030 Pral-Chr4143 248105 256945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4143g00030 307 396 C2H2 Transcription Factor Family AT3G01460 28.889 2.50e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4143g00030 - - gmx:100784908 1373.61