Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4143g00027 ATGGTATCACCTGGATCTGGAAAGACAACCGTCAGATATCCTATGACTCAGAACACTGATATGAGACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGAGTTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGTGGGGAGTAACCATTATTCTATGGATGAAGGTGATATATCTTCTATTAGGAGCAGGGCTCATGAAAGCATTCAGCATGCTGACGTGCTCAGTGTCAATTCCAGTCATGATTCTCTATCTGAAAATGCAGATAGTAAACTGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCCAGTGAGGTTAATTTAGCAAATGGTAGCCATTCCAAGAATGCAGACAGGAGAAATGTATCTTGTAGTTCGGCTTCAGTTAATATCTTAGGGGCAGAAGGATCTGGGAGTGCACAATCTTTTGACATGTGTGGCTTACCTGAGATTCCTCCTTCAAAAGATGTTGATACCATTGAGAGCTCGCCTCAGGTACAAGGCAATGATTCAAAGTCTCAATGTGTCAAGTCTCATTCAACTATTCCCAGATTAATGGACGTGGAAAGAGATGCACGTTCTCTTATTCCAGAAAAACCTGAATGCTTCACAGAAAATACTGATTCACCATTGAGAACAGTGATAGCAAATTCGGTTGTTTCTGGTGAGAAACCTCTTGTTGATGGTAGCTCCTCAGCTTCATTAAAAATAGATTCCAAGTCAGAAGCTGATGCTGTCAATGGAGGCATTCCAGGTGAAGCTCGTAATGATGAAGTCCAAGATGAGCAGGATAAAGCTGAGAAACCACTTGAATCACTTGGCATGGAGGATCCTCGATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGAGAAGACCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAACACACTTATTGCATGCGAGAAATGCTTAAGAAGGTCCCTGAAGGAGACTGGCAATGTGAAGAATGCAAATTTGCAGAGACATATAATCAGAGGCTAGGTTCAGATGTTGAAGAAAGAAAAATTTCAAAAGTTAGTTCAACATCACAACATTCTGGCAAGAGGCTGACTGAGAATATAGAACCGACTCCTCTAACAAAAAGGCAGGCTCTTGAATCAAGCTCAGGTTCACCGAAGTCATCAAGCCCCAAGAGAATAGTTGCACTTTCTCAAGAATCTTCATTAAAGAGCTTAGATAAAGGTAAAGTGAAGACTGATAATCAGATGCCTATTCGAAATCACTCTGGCAGTGATAACACGGAAACAGCTTGTTCTCCTTCTGCTGGCCCTCGGGGTCTACTTCGAAAGGGTATGCTGTTGAAATCTAATTCATTCAACGTGTTAAATTCAAAGCCTCGAGTCAAACCTGTTGATGATGTTGTTCCCCAAAAGCTGAAAGGGCCTGGTGAAAATACTTCTAAGAATATGGAGACACCTGCCCGGATGATAGGAAAATCTGTGTCATTTAAATCCATGCATTTGGGTCGTTCAAGTACAACTGCATCAAAAGTTAAATTGCTTTCATCAAAATCTGTACCCGCTCAAGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCCTTTGACAAGAAAAGTCTTTCTAGGGTTGATCGACCAGTGGTTTGCTCAACAACGGCTACCTCTGTTGTTTCAACACCCAAAGGTGACCAGAAGAACTCAACTATTAGTGAAACTATTAAATCTTCATCAGTTAGCAACAACCGAGACTTGAAGGTGAATCAAGATGGAAAATTAAGTACCTTATCAAAGTCTATTAGTAATGTAGGCCGTAAAGGTGTAGAACCTCAAGTCTGTTCAGGGAGGATATATACCAGTGGTGATGAATCTGTACAAGATGTGCAGCCTCGATTACGAGAAACAGCTAATCCAGTTGAGAAATCCAGAGACACCTCTAGTGACTGTGTGAAGACAGATGCCATTGCTACTTCCAAAGGATGCTGTCAAAAGTGTAAGGAGTCTGGTCATACTACAGAATGTTGCACAATTGGTAAAATCCAAGAATCTGGTAATGAAGTTTCTGTTGCTACCACAAGTAGTTATATAGAGGAAATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGAATGCCAGAAATATACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCGCAGACTTGAAATGTGAAGCCACAACTCAAGACCAAGTATTGGTTTCTTGCACACCAAAGTATAGCACATCTGGTGAAGAAATTCACGATGGGCAGGACACTATTGAGAGCTCTGCAGCTGCATCTTTGAAATGCATATCTGATGAAAAGCAGCTTAACTTAAACCAAAATGATTCTTGTTCTCAATTAGGAAACCCAGGTGTTGTTGGCTCTTCCATTGGAAAGAATGCTGTGAGAGACTTTCCTAGTCAACCTTTGGCGATCTCATGTGTTCTATCAAAGATGGCTGTTCCAGAATATGAATGCATCTGGAAGGGTATCTTTGAGCTGCATAGGAGCAGAAAGCCTCCTGACTTGTGTCCTGGACTTCAAGCGCATTTGTCCGCTTTTGCTTCCACAAAGGTTCTTGAAGTGGTGAACAAATTACCATCCAAAATTTCTCTCTGTGAAGTTCCTCGCTTGAGCACATGGCCTTCACAGTTTCATCAAGGTGGTGCTAAAGAAAATAATATCGCACTTTACTTCTTTGCCCAAGATGTTGAAAGTCATGAGAAACACTATGGCGTTCTTTTGGATCACATGATGAGGAATGACTTGGCACTTAAAGGAATCTTTGATGGTGTTGAACTGCTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGAAGAAGGATAAATCATTCAGATTCTGCGGAAAAGACTTGTATTCCTGCCTCGAGTATGATGCCAGTGAAAAAGGATTTTCCCACTGCCATTATGACTTTGTCTGAGGTCCACTGCTCACCAAAGCGAATGGATGAACAGTCAATTGCTGCGGATATGGCATGTATGGTTCTACCATCTAGTTCCCTAGACCAGAATCGCGCTCCAGTTGGTAGGGATGTTGATGTAAAAGAATCTAATATTGACCAGACACACTCAGGCTCACAAGTAAACTTAGAGGAGCAAGATGGTAAAATTGACACCAAACCTACATCAAGCAGTCTGGCTAGTGGTACACATTTCAGTCAAGAGTTGAAATCTACTGGCTCATATATGAAAGGTAGCCCACTGGAATGTGGACCAGAAAAGGAGTCTGAATCTTCTCCTGAAGCAATGGGAGCAAATGTTACGAATATGATTATGGAAACTGAAGTTGATCCGGGTATATCCGTTAACGAAGAGAAGTCTTTGCCTTCAGGGATTCCTTCTCTTGGCTCTCAAGAGATATGTGTTGCAACCACTGCCAGTGAGGACAGATTTTCTGAGAGAATGGCAGGTGATAGCAACCAACAAAGGCGTAAAAAGCAACAAAAAGATGATCAGTATATTGACTTTGAGACTCTTCAGGCAGAGCCAACTGTAGAAGGGGTGAAGCTTCAGCAGCCTAATGATGAAAGGTTTCGGCACATTGATCTAATGGACACTGCTATGCAGACTTCTGCAGTTACTTGCAAGAGACTTTGGAGCGAGGCAGACGTCAAATTGGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACAGATGATTGTGGAGCTTATGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATGGGAACAGTTTTGCGTCACATGCAAATGATCTTGGTACCGGCTCTTCAATTAAGGACAAAGGATGTGATGAAATCTGTGATGAGAAAATCATCCTGGAAGACTCGGGAACAATGGAAAGAACTTTCTTTCCAGTTGATGCGCATGACGTTAATGATTCTCATTTGGGTCCAAATAGCTCGTCGTTGAAAGGGCCTCATGTGTATGACGATCAATTTCATGACGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCAACACATAAAGGAATGCTGCCTTTCCTTGCTGGGGAAATAGAGAAGAAGCATTGTCAGGAAAAGCCTCCAGATTGCTTGGCAGATGAGCAAGAGGATGATGGTGTTGCGGCATCTCTCTCTCTTTCATTATCATTTCCATCGGTTAACAAAGAACGCGTTAAAACTGTTACAAAAGCAGAGCAGCTTTTGCCTGATGGGCGCCATGTGAATACCTCGTTGCTCCTTTTTGGGAAATTTGCGCACAAATAA 4434 0.4179 MVSPGSGKTTVRYPMTQNTDMRRESGTCNVCSAPCSSCMHFNRVCMGSKVEFSDENCRLVGSNHYSMDEGDISSIRSRAHESIQHADVLSVNSSHDSLSENADSKLTLSSKCQESKYLEGLDDNTSCISRASEVNLANGSHSKNADRRNVSCSSASVNILGAEGSGSAQSFDMCGLPEIPPSKDVDTIESSPQVQGNDSKSQCVKSHSTIPRLMDVERDARSLIPEKPECFTENTDSPLRTVIANSVVSGEKPLVDGSSSASLKIDSKSEADAVNGGIPGEARNDEVQDEQDKAEKPLESLGMEDPRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLKKVPEGDWQCEECKFAETYNQRLGSDVEERKISKVSSTSQHSGKRLTENIEPTPLTKRQALESSSGSPKSSSPKRIVALSQESSLKSLDKGKVKTDNQMPIRNHSGSDNTETACSPSAGPRGLLRKGMLLKSNSFNVLNSKPRVKPVDDVVPQKLKGPGENTSKNMETPARMIGKSVSFKSMHLGRSSTTASKVKLLSSKSVPAQDLKGTRLAKDSSAFDKKSLSRVDRPVVCSTTATSVVSTPKGDQKNSTISETIKSSSVSNNRDLKVNQDGKLSTLSKSISNVGRKGVEPQVCSGRIYTSGDESVQDVQPRLRETANPVEKSRDTSSDCVKTDAIATSKGCCQKCKESGHTTECCTIGKIQESGNEVSVATTSSYIEEMHKSDNVKAALQAALLRMPEIYKKKEVANQMDELGADLKCEATTQDQVLVSCTPKYSTSGEEIHDGQDTIESSAAASLKCISDEKQLNLNQNDSCSQLGNPGVVGSSIGKNAVRDFPSQPLAISCVLSKMAVPEYECIWKGIFELHRSRKPPDLCPGLQAHLSAFASTKVLEVVNKLPSKISLCEVPRLSTWPSQFHQGGAKENNIALYFFAQDVESHEKHYGVLLDHMMRNDLALKGIFDGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRINHSDSAEKTCIPASSMMPVKKDFPTAIMTLSEVHCSPKRMDEQSIAADMACMVLPSSSLDQNRAPVGRDVDVKESNIDQTHSGSQVNLEEQDGKIDTKPTSSSLASGTHFSQELKSTGSYMKGSPLECGPEKESESSPEAMGANVTNMIMETEVDPGISVNEEKSLPSGIPSLGSQEICVATTASEDRFSERMAGDSNQQRRKKQQKDDQYIDFETLQAEPTVEGVKLQQPNDERFRHIDLMDTAMQTSAVTCKRLWSEADVKLEDGENSSKKLKTDDCGAYGCSSSGGRDSYGNSFASHANDLGTGSSIKDKGCDEICDEKIILEDSGTMERTFFPVDAHDVNDSHLGPNSSSLKGPHVYDDQFHDEIPNLELALGGEMKPTHKGMLPFLAGEIEKKHCQEKPPDCLADEQEDDGVAASLSLSLSFPSVNKERVKTVTKAEQLLPDGRHVNTSLLLFGKFAHK 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4143g00027 1477 SMART PHD_3 324 371 IPR001965 -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 283 305 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 383 473 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 455 473 - -
Pral4143g00027 1477 SUPERFAMILY FYVE/PHD zinc finger 311 373 IPR011011 -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 1202 1222 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 251 318 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 1201 1222 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 1110 1132 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 598 619 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 1087 1151 - -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 252 266 - -
Pral4143g00027 1477 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 383 IPR013083 -
Pral4143g00027 1477 MobiDBLite consensus disorder prediction 393 443 - -
Pral4143g00027 1477 PANTHER - 322 1054 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4143g00027 Pral-Chr4143 247238 256945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4143g00027 321 410 C2H2 Transcription Factor Family AT3G01460 28.889 2.46e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4143g00027 - - gmx:100784908 1373.61