Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4143g00022 ATGTCTCGTACTTGCCTTCTGGTATCACCTGGATCTGGAAAGACAACCGTCAGATATCCTATGACTCAGAACACTGATATGAGACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGAGTTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGTGGGGAGTAACCATTATTCTATGGATGAAGGTGATATATCTTCTATTAGGAGCAGGGCTCATGAAAGCATTCAGCATGCTGACGTGCTCAGTGTCAATTCCAGTCATGATTCTCTATCTGAAAATGCAGATAGTAAACTGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCCAGTGAGGTTAATTTAGCAAATGGTAGCCATTCCAAGAATGCAGACAGGAGAAATGTATCTTGTAGTTCGGCTTCAGTTAATATCTTAGGGGCAGAAGGATCTGGGAGTGCACAATCTTTTGACATGTGTGGCTTACCTGAGATTCCTCCTTCAAAAGATGTTGATACCATTGAGAGCTCGCCTCAGGTACAAGGCAATGATTCAAAGTCTCAATGTGTCAAGTCTCATTCAACTATTCCCAGATTAATGGACGTGGAAAGAGATGCACGTTCTCTTATTCCAGAAAAACCTGAATGCTTCACAGAAAATACTGATTCACCATTGAGAACAGTGATAGCAAATTCGGTTGTTTCTGGTGAGAAACCTCTTGTTGATGGTAGCTCCTCAGCTTCATTAAAAATAGATTCCAAGTCAGAAGCTGATGCTGTCAATGGAGGCATTCCAGGTGAAGCTCGTAATGATGAAGTCCAAGATGAGCAGGATAAAGCTGAGAAACCACTTGAATCACTTGGCATGGAGGATCCTCGATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGAGAAGACCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAACACACTTATTGCATGCGAGAAATGCTTAAGAAGGTCCCTGAAGGAGACTGGCAATGTGAAGAATGCAAATTTGCAGAGACATATAATCAGAGGCTAGATGTTGAAGAAAGAAAAATTTCAAAAGTTAGTTCAACATCACAACATTCTGGCAAGAGGCTGACTGAGAATATAGAACCGACTCCTCTAACAAAAAGGCAGGCTCTTGAATCAAGCTCAGGTTCACCGAAGTCATCAAGCCCCAAGAGAATAGTTGCACTTTCTCAAGAATCTTCATTAAAGAGCTTAGATAAAGGTAAAGTGAAGACTGATAATCAGATGCCTATTCGAAATCACTCTGGCAGTGATAACACGGAAACAGCTTGTTCTCCTTCTGCTGGCCCTCGGGGTCTACTTCGAAAGGGTATGCTGTTGAAATCTAATTCATTCAACGTGTTAAATTCAAAGCCTCGAGTCAAACCTGTTGATGATGTTGTTCCCCAAAAGCTGAAAGGGCCTGGTGAAAATACTTCTAAGAATATGGAGACACCTGCCCGGATGATAGGAAAATCTGTGTCATTTAAATCCATGCATTTGGGTCGTTCAAGTACAACTGCATCAAAAGTTAAATTGCTTTCATCAAAATCTGTACCCGCTCAAGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCCTTTGACAAGAAAAGTCTTTCTAGGGTTGATCGACCAGTGGTTTGCTCAACAACGGCTACCTCTGTTGTTTCAACACCCAAAGGTGACCAGAAGAACTCAACTATTAGTGAAACTATTAAATCTTCATCAGTTAGCAACAACCGAGACTTGAAGGTGAATCAAGATGGAAAATTAAGTACCTTATCAAAGTCTATTAGTAATGTAGGCCGTAAAGGTGTAGAACCTCAAGTCTGTTCAGGGAGGATATATACCAGTGGTGATGAATCTGTACAAGATGTGCAGCCTCGATTACGAGAAACAGCTAATCCAGTTGAGAAATCCAGAGACACCTCTAGTGACTGTGTGAAGACAGATGCCATTGCTACTTCCAAAGGATGCTGTCAAAAGTGTAAGGAGTCTGGTCATACTACAGAATGTTGCACAATTGGTAAAATCCAAGAATCTGGTAATGAAGTTTCTGTTGCTACCACAAGTAGTTATATAGAGGAAATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGAATGCCAGAAATATACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCGCAGACTTGAAATGTGAAGCCACAACTCAAGACCAAGTATTGGTTTCTTGCACACCAAAGTATAGCACATCTGGTGAAGAAATTCACGATGGGCAGGACACTATTGAGAGCTCTGCAGCTGCATCTTTGAAATGCATATCTGATGAAAAGCAGCTTAACTTAAACCAAAATGATTCTTGTTCTCAATTAGGAAACCCAGGTGTTGTTGGCTCTTCCATTGGAAAGAATGCTGTGAGAGACTTTCCTAGTCAACCTTTGGCGATCTCATGTGTTCTATCAAAGATGGCTGTTCCAGAATATGAATGCATCTGGAAGGGTATCTTTGAGCTGCATAGGAGCAGAAAGCCTCCTGACTTGTGTCCTGGACTTCAAGCGCATTTGTCCGCTTTTGCTTCCACAAAGGTTCTTGAAGTGGTGAACAAATTACCATCCAAAATTTCTCTCTGTGAAGTTCCTCGCTTGAGCACATGGCCTTCACAGTTTCATCAAGGTGGTGCTAAAGAAAATAATATCGCACTTTACTTCTTTGCCCAAGATGTTGAAAGTCATGAGAAACACTATGGCGTTCTTTTGGATCACATGATGAGGAATGACTTGGCACTTAAAGGAATCTTTGATGGTGTTGAACTGCTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGAAGAAGGATAAATCATTCAGATTCTGCGGAAAAGACTTGTATTCCTGCCTCGAGTATGATGCCAGTGAAAAAGGATTTTCCCACTGCCATTATGACTTTGTCTGAGGTCCACTGCTCACCAAAGCGAATGGATGAACAGTCAATTGCTGCGGATATGGCATGTATGGTTCTACCATCTAGTTCCCTAGACCAGAATCGCGCTCCAGTTGGTAGGGATGTTGATGTAAAAGAATCTAATATTGACCAGACACACTCAGGCTCACAAGTAAACTTAGAGGAGCAAGATGGTAAAATTGACACCAAACCTACATCAAGCAGTCTGGCTAGTGGTACACATTTCAGTCAAGAGTTGAAATCTACTGGCTCATATATGAAAGGTAGCCCACTGGAATGTGGACCAGAAAAGGAGTCTGAATCTTCTCCTGAAGCAATGGGAGCAAATGTTACGAATATGATTATGGAAACTGAAGTTGATCCGGGTATATCCGTTAACGAAGAGAAGTCTTTGCCTTCAGGGATTCCTTCTCTTGGCTCTCAAGAGATATGTGTTGCAACCACTGCCAGTGAGGACAGATTTTCTGAGAGAATGGCAGGTGATAGCAACCAACAAAGGCGTAAAAAGCAACAAAAAGATGATCAGTATATTGACTTTGAGACTCTTCAGGCAGAGCCAACTGTAGAAGGGGTGAAGCTTCAGCAGCCTAATGATGAAAGGTTTCGGCACATTGATCTAATGGACACTGCTATGCAGACTTCTGCAGTTACTTGCAAGAGACTTTGGAGCGAGGCAGACGTCAAATTGGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACAGATGATTGTGGAGCTTATGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATGGGAACAGTTTTGCGTCACATGCAAATGATCTTGGTACCGGCTCTTCAATTAAGGACAAAGGATGTGATGAAATCTGTGATGAGAAAATCATCCTGGAAGACTCGGGAACAATGGAAAGAACTTTCTTTCCAGTTGATGCGCATGACGTTAATGATTCTCATTTGGGTCCAAATAGCTCGTCGTTGAAAGGGCCTCATGTGTATGACGATCAATTTCATGACGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCAACACATAAAGGAATGCTGCCTTTCCTTGCTGGGGAAATAGAGAAGAAGCATTGTCAGGAAAAGCCTCCAGATTGCTTGGCAGATGAGCAAGAGGATGATGGTGTTGCGGCATCTCTCTCTCTTTCATTATCATTTCCATCGGTTAACAAAGAACGCGTTAAAACTGTTACAAAAGCAGAGCAGCTTTTGCCTGATGGGCGCCATGTGAATACCTCGTTGCTCCTTTTTGGGAAATTTGCGCACAAATAA 4446 0.4181 MSRTCLLVSPGSGKTTVRYPMTQNTDMRRESGTCNVCSAPCSSCMHFNRVCMGSKVEFSDENCRLVGSNHYSMDEGDISSIRSRAHESIQHADVLSVNSSHDSLSENADSKLTLSSKCQESKYLEGLDDNTSCISRASEVNLANGSHSKNADRRNVSCSSASVNILGAEGSGSAQSFDMCGLPEIPPSKDVDTIESSPQVQGNDSKSQCVKSHSTIPRLMDVERDARSLIPEKPECFTENTDSPLRTVIANSVVSGEKPLVDGSSSASLKIDSKSEADAVNGGIPGEARNDEVQDEQDKAEKPLESLGMEDPRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLKKVPEGDWQCEECKFAETYNQRLDVEERKISKVSSTSQHSGKRLTENIEPTPLTKRQALESSSGSPKSSSPKRIVALSQESSLKSLDKGKVKTDNQMPIRNHSGSDNTETACSPSAGPRGLLRKGMLLKSNSFNVLNSKPRVKPVDDVVPQKLKGPGENTSKNMETPARMIGKSVSFKSMHLGRSSTTASKVKLLSSKSVPAQDLKGTRLAKDSSAFDKKSLSRVDRPVVCSTTATSVVSTPKGDQKNSTISETIKSSSVSNNRDLKVNQDGKLSTLSKSISNVGRKGVEPQVCSGRIYTSGDESVQDVQPRLRETANPVEKSRDTSSDCVKTDAIATSKGCCQKCKESGHTTECCTIGKIQESGNEVSVATTSSYIEEMHKSDNVKAALQAALLRMPEIYKKKEVANQMDELGADLKCEATTQDQVLVSCTPKYSTSGEEIHDGQDTIESSAAASLKCISDEKQLNLNQNDSCSQLGNPGVVGSSIGKNAVRDFPSQPLAISCVLSKMAVPEYECIWKGIFELHRSRKPPDLCPGLQAHLSAFASTKVLEVVNKLPSKISLCEVPRLSTWPSQFHQGGAKENNIALYFFAQDVESHEKHYGVLLDHMMRNDLALKGIFDGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRINHSDSAEKTCIPASSMMPVKKDFPTAIMTLSEVHCSPKRMDEQSIAADMACMVLPSSSLDQNRAPVGRDVDVKESNIDQTHSGSQVNLEEQDGKIDTKPTSSSLASGTHFSQELKSTGSYMKGSPLECGPEKESESSPEAMGANVTNMIMETEVDPGISVNEEKSLPSGIPSLGSQEICVATTASEDRFSERMAGDSNQQRRKKQQKDDQYIDFETLQAEPTVEGVKLQQPNDERFRHIDLMDTAMQTSAVTCKRLWSEADVKLEDGENSSKKLKTDDCGAYGCSSSGGRDSYGNSFASHANDLGTGSSIKDKGCDEICDEKIILEDSGTMERTFFPVDAHDVNDSHLGPNSSSLKGPHVYDDQFHDEIPNLELALGGEMKPTHKGMLPFLAGEIEKKHCQEKPPDCLADEQEDDGVAASLSLSLSFPSVNKERVKTVTKAEQLLPDGRHVNTSLLLFGKFAHK 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 392 478 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 258 272 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 459 477 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 1206 1226 - -
Pral4143g00022 1481 SUPERFAMILY FYVE/PHD zinc finger 317 379 IPR011011 -
Pral4143g00022 1481 SMART PHD_3 330 377 IPR001965 -
Pral4143g00022 1481 PANTHER - 328 1052 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 1205 1226 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 1114 1136 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 1091 1155 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 289 311 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 397 447 - -
Pral4143g00022 1481 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 391 IPR013083 -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 257 324 - -
Pral4143g00022 1481 MobiDBLite consensus disorder prediction 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4143g00022 Pral-Chr4143 247188 256945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4143g00022 327 414 C2H2 Transcription Factor Family AT3G01460 29.545 1.53e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4143g00022 - - gmx:100784908 1378.62