Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4143g00020 ATGTCTCGTACTTGCCTTCTGGTATCACCTGGATCTGGAAAGACAACCGTCAGATATCCTATGACTCAGAACACTGATATGAGACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGAGTTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGTGGGGAGTAACCATTATTCTATGGATGAAGGTGATATATCTTCTATTAGGAGCAGGGCTCATGAAAGCATTCAGCATGCTGACGTGCTCAGTGTCAATTCCAGTCATGATTCTCTATCTGAAAATGCAGATAGTAAACTGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCCAGTGAGGTTAATTTAGCAAATGGTAGCCATTCCAAGAATGCAGACAGGAGAAATGTATCTTGTAGTTCGGCTTCAGTTAATATCTTAGGGGCAGAAGGATCTGGGAGTGCACAATCTTTTGACATGTGTGGCTTACCTGAGATTCCTCCTTCAAAAGATGTTGATACCATTGAGAGCTCGCCTCAGGTACAAGGCAATGATTCAAAGTCTCAATGTGTCAAGTCTCATTCAACTATTCCCAGATTAATGGACGTGGAAAGAGATGCACGTTCTCTTATTCCAGAAAAACCTGAATGCTTCACAGAAAATACTGATTCACCATTGAGAACAGTGATAGCAAATTCGGTTGTTTCTGGTGAGAAACCTCTTGTTGATGGTAGCTCCTCAGCTTCATTAAAAATAGATTCCAAGTCAGAAGCTGATGCTGTCAATGGAGGCATTCCAGGTGAAGCTCGTAATGATGAAGTCCAAGATGAGCAGGATAAAGCTGAGAAACCACTTGAATCACTTGGCATGGAGGATCCTCGATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGAGAAGACCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAACACACTTATTGCATGCGAGAAATGCTTAAGAAGGTCCCTGAAGGAGACTGGCAATGTGAAGAATGCAAATTTGCAGAGACATATAATCAGAGGCTAGGTTCAGATGTTGAAGAAAGAAAAATTTCAAAAGTTAGTTCAACATCACAACATTCTGGCAAGAGGCTGACTGAGAATATAGAACCGACTCCTCTAACAAAAAGGCAGGCTCTTGAATCAAGCTCAGGTTCACCGAAGTCATCAAGCCCCAAGAGAATAGTTGCACTTTCTCAAGAATCTTCATTAAAGAGCTTAGATAAAGGTAAAGTGAAGACTGATAATCAGATGCCTATTCGAAATCACTCTGGCAGTGATAACACGGAAACAGCTTGTTCTCCTTCTGCTGGCCCTCGGGGTCTACTTCGAAAGGGTATGCTGTTGAAATCTAATTCATTCAACGTGTTAAATTCAAAGCCTCGAGTCAAACCTGTTGATGATGTTGTTCCCCAAAAGCTGAAAGGGCCTGGTGAAAATACTTCTAAGAATATGGAGACACCTGCCCGGATGATAGGAAAATCTGTGTCATTTAAATCCATGCATTTGGGTCGTTCAAGTACAACTGCATCAAAAGTTAAATTGCTTTCATCAAAATCTGTACCCGCTCAAGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCCTTTGACAAGAAAAGTCTTTCTAGGGTTGATCGACCAGTGGTTTGCTCAACAACGGCTACCTCTGTTGTTTCAACACCCAAAGGTGACCAGAAGAACTCAACTATTAGTGAAACTATTAAATCTTCATCAGTTAGCAACAACCGAGACTTGAAGGTGAATCAAGATGGAAAATTAAGTACCTTATCAAAGTCTATTAGTAATGTAGGCCGTAAAGGTGTAGAACCTCAAGTCTGTTCAGGGAGGATATATACCAGTGGTGATGAATCTGTACAAGATGTGCAGCCTCGATTACGAGAAACAGCTAATCCAGTTGAGAAATCCAGAGACACCTCTAGTGACTGTGTGAAGACAGATGCCATTGCTACTTCCAAAGGATGCTGTCAAAAGTGTAAGGAGTCTGGTCATACTACAGAATGTTGCACAATTGGTAAAATCCAAGAATCTGGTAATGAAGTTTCTGTTGCTACCACAAGTAGTTATATAGAGGAAATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGAATGCCAGAAATATACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCGCAGACTTGAAATGTGAAGCCACAACTCAAGACCAAGTATTGGTTTCTTGCACACCAAAGTATAGCACATCTGGTGAAGAAATTCACGATGGGCAGGACACTATTGAGAGCTCTGCAGCTGCATCTTTGAAATGCATATCTGATGAAAAGCAGCTTAACTTAAACCAAAATGATTCTTGTTCTCAATTAGGAAACCCAGGTGTTGTTGGCTCTTCCATTGGAAAGAATGCTGTGAGAGACTTTCCTAGTCAACCTTTGGCGATCTCATGTGTTCTATCAAAGATGGCTGTTCCAGAATATGAATGCATCTGGAAGGGTATCTTTGAGCTGCATAGGAGCAGAAAGCCTCCTGACTTGTGTCCTGGACTTCAAGCGCATTTGTCCGCTTTTGCTTCCACAAAGGTTCTTGAAGTGGTGAACAAATTACCATCCAAAATTTCTCTCTGTGAAGTTCCTCGCTTGAGCACATGGCCTTCACAGTTTCATCAAGGTGGTGCTAAAGAAAATAATATCGCACTTTACTTCTTTGCCCAAGATGTTGAAAGTCATGAGAAACACTATGGCGTTCTTTTGGATCACATGATGAGGAATGACTTGGCACTTAAAGGAATCTTTGATGGTGTTGAACTGCTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGAAGAAGGATAAATCATTCAGATTCTGCGGAAAAGACTTGTATTCCTGCCTCGAGTATGATGCCAGTGAAAAAGGATTTTCCCACTGCCATTATGACTTTGTCTGAGGTCCACTGCTCACCAAAGCGAATGGATGAACAGTCAATTGCTGCGGATATGGCATGTATGGTTCTACCATCTAGTTCCCTAGACCAGAATCGCGCTCCAGTTGGTAGGGATGTTGATGTAAAAGAATCTAATATTGACCAGACACACTCAGGCTCACAAGTAAACTTAGAGGAGCAAGATGGTAAAATTGACACCAAACCTACATCAAGCAGTCTGGCTAGTGGTACACATTTCAGTCAAGAGTTGAAATCTACTGGCTCATATATGAAAGGTAGCCCACTGGAATGTGGACCAGAAAAGGAGTCTGAATCTTCTCCTGAAGCAATGGGAGCAAATGTTACGAATATGATTATGGAAACTGAAGTTGATCCGGGTATATCCGTTAACGAAGAGAAGTCTTTGCCTTCAGGGATTCCTTCTCTTGGCTCTCAAGAGATATGTGTTGCAACCACTGCCAGTGAGGACAGATTTTCTGAGAGAATGGCAGGTGATAGCAACCAACAAAGGCGTAAAAAGCAACAAAAAGATGATCAGTATATTGACTTTGAGACTCTTCAGGCAGAGCCAACTGTAGAAGGGGTGAAGCTTCAGCAGCCTAATGATGAAAGGTTTCGGCACATTGATCTAATGGACACTGCTATGCAGACTTCTGCAGTTACTTGCAAGAGACTTTGGAGCGAGGCAGACGTCAAATTGGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACAGATGATTGTGGAGCTTATGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATGGGAACAGTTTTGCGTCACATGCAAATGATCTTGGTACCGGCTCTTCAATTAAGGACAAAGGATGTGATGAAATCTGTGATGAGAAAATCATCCTGGAAGACTCGGGAACAATGGAAAGAACTTTCTTTCCAGTTGATGCGCATGACGTTAATGATTCTCATTTGGGTCCAAATAGCTCGTCGTTGAAAGGGCCTCATGTGTATGACGATCAATTTCATGACGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCAACACATAAAGGAATGCTGCCTTTCCTTGCTGGGGAAATAGAGAAGAAGCATTGTCAGGAAAAGCCTCCAGATTGCTTGGCAGATGAGCAAGAGGATGATGGTGTTGCGGCATCTCTCTCTCTTTCATTATCATTTCCATCGGTTAACAAAGAACGCGTTAAAACTGTTACAAAAGCAGAGCAGCTTTTGCCTGATGGGCGCCATGTGAATACCTCGTTGCTCCTTTTTGGGAAATTTGCGCACAAATAA 4452 0.4182 MSRTCLLVSPGSGKTTVRYPMTQNTDMRRESGTCNVCSAPCSSCMHFNRVCMGSKVEFSDENCRLVGSNHYSMDEGDISSIRSRAHESIQHADVLSVNSSHDSLSENADSKLTLSSKCQESKYLEGLDDNTSCISRASEVNLANGSHSKNADRRNVSCSSASVNILGAEGSGSAQSFDMCGLPEIPPSKDVDTIESSPQVQGNDSKSQCVKSHSTIPRLMDVERDARSLIPEKPECFTENTDSPLRTVIANSVVSGEKPLVDGSSSASLKIDSKSEADAVNGGIPGEARNDEVQDEQDKAEKPLESLGMEDPRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLKKVPEGDWQCEECKFAETYNQRLGSDVEERKISKVSSTSQHSGKRLTENIEPTPLTKRQALESSSGSPKSSSPKRIVALSQESSLKSLDKGKVKTDNQMPIRNHSGSDNTETACSPSAGPRGLLRKGMLLKSNSFNVLNSKPRVKPVDDVVPQKLKGPGENTSKNMETPARMIGKSVSFKSMHLGRSSTTASKVKLLSSKSVPAQDLKGTRLAKDSSAFDKKSLSRVDRPVVCSTTATSVVSTPKGDQKNSTISETIKSSSVSNNRDLKVNQDGKLSTLSKSISNVGRKGVEPQVCSGRIYTSGDESVQDVQPRLRETANPVEKSRDTSSDCVKTDAIATSKGCCQKCKESGHTTECCTIGKIQESGNEVSVATTSSYIEEMHKSDNVKAALQAALLRMPEIYKKKEVANQMDELGADLKCEATTQDQVLVSCTPKYSTSGEEIHDGQDTIESSAAASLKCISDEKQLNLNQNDSCSQLGNPGVVGSSIGKNAVRDFPSQPLAISCVLSKMAVPEYECIWKGIFELHRSRKPPDLCPGLQAHLSAFASTKVLEVVNKLPSKISLCEVPRLSTWPSQFHQGGAKENNIALYFFAQDVESHEKHYGVLLDHMMRNDLALKGIFDGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRINHSDSAEKTCIPASSMMPVKKDFPTAIMTLSEVHCSPKRMDEQSIAADMACMVLPSSSLDQNRAPVGRDVDVKESNIDQTHSGSQVNLEEQDGKIDTKPTSSSLASGTHFSQELKSTGSYMKGSPLECGPEKESESSPEAMGANVTNMIMETEVDPGISVNEEKSLPSGIPSLGSQEICVATTASEDRFSERMAGDSNQQRRKKQQKDDQYIDFETLQAEPTVEGVKLQQPNDERFRHIDLMDTAMQTSAVTCKRLWSEADVKLEDGENSSKKLKTDDCGAYGCSSSGGRDSYGNSFASHANDLGTGSSIKDKGCDEICDEKIILEDSGTMERTFFPVDAHDVNDSHLGPNSSSLKGPHVYDDQFHDEIPNLELALGGEMKPTHKGMLPFLAGEIEKKHCQEKPPDCLADEQEDDGVAASLSLSLSFPSVNKERVKTVTKAEQLLPDGRHVNTSLLLFGKFAHK 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 1207 1228 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 1116 1138 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 604 625 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 1093 1157 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 258 272 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 399 449 - -
Pral4143g00020 1483 SUPERFAMILY FYVE/PHD zinc finger 317 379 IPR011011 -
Pral4143g00020 1483 SMART PHD_3 330 377 IPR001965 -
Pral4143g00020 1483 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 389 IPR013083 -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 389 479 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 289 311 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 461 479 - -
Pral4143g00020 1483 PANTHER - 328 1098 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 1208 1228 - -
Pral4143g00020 1483 MobiDBLite consensus disorder prediction 257 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4143g00020 Pral-Chr4143 247188 256945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4143g00020 327 416 C2H2 Transcription Factor Family AT3G01460 28.889 2.51e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4143g00020 - - gmx:100784908 1373.61